Gene RPD_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2258 
Symbol 
ID4022743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2522774 
End bp2523751 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID637962453 
ProductPpx/GppA phosphatase 
Protein accessionYP_569394 
Protein GI91976735 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.88474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.613366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC ACGGCGGTGT CTATGCTGCG CTTGATCTCG GCACCAACAA CTGCCGGCTG 
CTGGTGGCGC GGCCGGCGGG CGACAGCTTT CGCGTGGTGG ACTCGTTCTC GCGGATCATC
CGGCTCGGCG AGGGCGTGTC CGTCACCGGA CGGATCAGCG ACGCCGCGAT TGCGCGGGCG
ATCTCCGCGC TGGCGATCTG CCAGGACAAG ATCAAGCAGC GCAAGGCGAA ACGGCTGCGG
CTGATCGCGA CCGAGGCCTG CCGGGCCGCC GTCAACGCCG ACGAGTTTTG TGACAAGGTC
GCCCACGCCA CCGGCATTCG GCTGGAGATC ATCGACCGTG AGACCGAGGC TCGGCTCGCC
GCGATCGGCT GCTCGCCGCT GGTCGATCCG ACCGGCCGCG GCGCGGTGCT GTTCGATATC
GGCGGCGGCT CCAGCGAGCT GGTGCGGCTC GCGCGCGATC CGGCGCGGCC GGACCTGGCG
CCGCGGATCA AGGCGTGGAT GTCGATCCCG CTCGGGGTGG TGACCCTGGC CGAGCAGTTC
GGCGGCAAGG TGGTGACGCC GCAGACCTAT GCGGCGATGA TCGACGAGGT CACGGCGCAT
GTCGCGCCGT TTGCCGCCGA GCACGGCGGC GACCTCGGCG GCCTGCATCT GCTCGGCACC
TCCGGCACGG TGACGACGCT GGCGGGGCTT TATCTCGATC TGATCCGCTA CGACCGCCGC
CGCGTCGACG GGATCTGGAT GAGCGACGAC GAACTGACGA TGACGATCGA CCGGCTGCGC
AGCATGAGCT ATCACGACCG CGCCCAGAAC CATTGCATCG GCACGGAACG GGCCGATCTG
GTGCTGGCGG GCTGCGCGAT CCTCGACGCC GTGCGCGCCG CGTTCCCGCT GCCGCGGCTG
CGGGTCGCCG ACAGGGGCCT GCGCGAAGGC ATGCTGGTCG AGATGATGCG CGAGGACGGC
GTGCTCGGCG CCGCCTGA
 
Protein sequence
MAPHGGVYAA LDLGTNNCRL LVARPAGDSF RVVDSFSRII RLGEGVSVTG RISDAAIARA 
ISALAICQDK IKQRKAKRLR LIATEACRAA VNADEFCDKV AHATGIRLEI IDRETEARLA
AIGCSPLVDP TGRGAVLFDI GGGSSELVRL ARDPARPDLA PRIKAWMSIP LGVVTLAEQF
GGKVVTPQTY AAMIDEVTAH VAPFAAEHGG DLGGLHLLGT SGTVTTLAGL YLDLIRYDRR
RVDGIWMSDD ELTMTIDRLR SMSYHDRAQN HCIGTERADL VLAGCAILDA VRAAFPLPRL
RVADRGLREG MLVEMMREDG VLGAA