Gene RPD_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2194 
Symbol 
ID4022679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2452732 
End bp2453553 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID637962389 
Producthypothetical protein 
Protein accessionYP_569330 
Protein GI91976671 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.988772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.764817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCA TGGCGGAGCG CTTCCAGCAA TGGATGGCCG GCAATCCGGA CGACGCGGTG 
CTGCGCTTGC TGTTCCGTGG GCTGGTCGCG GTCTCGATCG GCGCCTTGGC GTTCGATCTC
GCCAGTGCCA ATGGCTGGAT TGCGCCGGCG GATCTGGCGT CGACGCCCGC CGAACAACGC
GAGATCATGC CGGGCGATCT GCCGGCGCTG CCGGCGATCC TGTCGCCTTG GCTGCCGGGT
GGCGATCGCC TCGCGCCGCT GCCGCAACCG GACGGCGTGC TCGGCAAGGG AATGACGTTC
GAACTGGTCA GCGGTGGGCG GCTCACCGCC ACCGGCACGA TCACGCCCGG CACGGCCGAG
GCTTTCGCCA AGGCGATCGA GCGTCATGGC GAGTACATCA AGACCGTGGT GCTGAATTCG
CCGGGCGGCT CGGTCAGCGA TGCGCTGACG ATGGGGCGAC TGATCCGCGA CCGCAAGCTC
GCGACCTTCG TCGAGGCCGG CAGATATTGC GCGTCGTCCT GTCCACTGGT GTTCTTCGGT
GGCGTCGAGC GCCGCGCCGG CGACAAGGCC GCAATCGGCG TGCATCAGGT CTTCGCGGCG
AAAACCGCGA CGTCTGCCGC GATGCCCCGC GACCAGATGA GCGACGCGCA GCGAATCTCA
GCGCGTTGCC AGCGTTATCT GGCCGACATG GGAATCGACC TTCAGGTCTG GATCCACGCA
ATGGAGACGC CGAAGGATCG GCTGTTCGTG TTCAAGCCGG ACGAGCTGAC AAAATTCGCC
ATCGTCACCG CCCAGCCGCC GGCGCCATCG CAGAAGCCGT AG
 
Protein sequence
MGGMAERFQQ WMAGNPDDAV LRLLFRGLVA VSIGALAFDL ASANGWIAPA DLASTPAEQR 
EIMPGDLPAL PAILSPWLPG GDRLAPLPQP DGVLGKGMTF ELVSGGRLTA TGTITPGTAE
AFAKAIERHG EYIKTVVLNS PGGSVSDALT MGRLIRDRKL ATFVEAGRYC ASSCPLVFFG
GVERRAGDKA AIGVHQVFAA KTATSAAMPR DQMSDAQRIS ARCQRYLADM GIDLQVWIHA
METPKDRLFV FKPDELTKFA IVTAQPPAPS QKP