| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2189 |
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| Symbol | |
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| ID | 4022674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2445730 |
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| End bp | 2448126 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962384 |
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| Product | RNA binding S1 |
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| Protein accession | YP_569325 |
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| Protein GI | 91976666 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCGA TTCGCCGCGC ATGCGGTGAT CATATCGATC TCCTCGCCCA CCCTTTCGAG
AGACCTTCAG TGCCGAAAAT CGCGTCCGTC ATCGCTACAG AACTCGCCGT CCGTGAAGAG
CAGGTCCAGG CCGCCATCGA CCTGCTCGAC GGCGGATCGA CCGTCCCGTT CATCGCGCGA
TATCGCAAGG AAGCGACGGG GATGCTGGAC GACTCGCAAT TGCGGACGCT GGAAGAACGG
CTGAGCTATC TGCGCGAGAT GGACGCGCGC CGGATCACGA TCATCGACAG CATCAAGCAA
CAGGGCAAGC TGACACCCGA GATCGAGAAA GCCCTGCTTG CGGCGGACAC CAAGGCGCGG
CTCGAAGATA TCTATCTGCC GTTCAAGGAG AAGCGTCGCA CCAAGGCGCA GATCGCGCGC
GAGGCCGGGC TCGAACCGCT CGCCGAGATG CTGCTGTTGA ATCCCGACAA GCATCCGGAG
ACCGAGGCCG CGGCTTACGT CAAAACCGAC GGCGAGCATC CGGTTGCGGA CGTCAAGGCC
GCACTGGAAG GCGCCCGCTC GATTCTGGTC GAGCGCTTCT CCGAGCACGC CGACCTCACC
GGCAGTCTGC GCGAAGCGAT GTGGAGCCGC GGCCAGATCA AGGCCTCCGT TCGCGACGGC
AAGAAGACCT CGGGCGCGAA GTTCGCGGAT TATTTCGATT TCTCCGAGCC CTACGAAAAA
CTGCCGTCCC ACCGAATTCT GGCGCTGCTG CGCGGTGAGA AAGAGGAAGT GCTGGCGCTG
GATTTCGGCG ACGGCGAAGA TCCCGATTCG AAAGAGCCGA CACAATACGA GAACCGCATC
GCGGCGACTT TCAGCATTTC ACGCAAAGGC CGGCCGGCTG ATTCCTTCCT GTCTGATTGC
GTGCGCTGGG CGTGGCGCAC CCGGATCAAG ACCGGGCTCG CGCTCGACAT GCGGATGCGG
CTTTGGCAGC AGGCCGAGAA GGAAGCGGTG CGGGTGTTCG CCGCCAATCT GCGCGACCTG
TTGCTCGCCG CCCCCGCAGG CGGACGCGCG ACGCTGGGCC TCGATCCGGG CTTTCGCACC
GGTGTGAAGG TCGCCGTGAT CGACCAGACC GGCAAGTTCG TCGACCACAC CACGATTTAT
CCGCACGAGC CGGCGCGAAA ATGGAACGAG AGCATGTTCG AGCTCGCGCA GCTCTGCGTG
AAGCACCGCA TCGAACTGGT CGCGATCGGC AACGGCACCG CATCGCGCGA GACCGAAAAG
CTCGTCGCCG ACCTGATGAA GCTCAAACCC GAACTGAAGC TCACCAAGGC GATCGTCTCC
GAAGCCGGAG CGTCGGTGTA CTCGGCGTCT GAATTTGCCT CCAAGGAGTT TCCCGATCTC
GACGTCTCGA TCCGCGGCGC GGTCTCGATC GCGCGGCGGC TGCAGGACCC GCTCGGTGAA
CTCGTGAAGG TGCCGCCGCA ATCGATCGGC GTTGGTCAGT ATCAACACGA TCTCAATCAG
TACACGCTGT CGCGCGCGCT CGACGCCACG GTTGAAGACT GCGTCAACGC GGTCGGCGTC
GATCTCAACA CCGCCTCGGC GCCGCTTCTC GCACGCGTCT CCGGCATCGG CGATACACTC
GCGACGAACA TCGTCGCGCA CCGCGACGCC AACGGCCCCT TCCCGAGCCG CGCCAAGCTC
AAGGAAGTGC CGCGGCTCGG CCCGAAGGCG TTCGAGCAAT GCGCCGGCTT CCTGCGGATT
CGCGACGGCG AGAACCCGCT CGACGCGTCC GGCGTCCATC CCGAGGCCTA CCCGCTGGTG
AAGAAGATTC TGGCGGCGAC CAAAAGCGAC ATCAAGGCGC TGATCGGCCA GACCAGCAAA
TTGAAGTCGC TGCAGCCGGC GTCCTTCGCC GACGACAAAT TCGGCATCCC GACGGTGACC
GACATTCTGA AGGAACTGGA GAAGCCCGGC CGCGATCCGC GCCCCGAATT CAAGACGGCG
ACCTTCCAGG AAGGCGTCGA GAAGATCACC GACCTCAAGC CCGGCATGAT CCTCGAGGCG
ACGATTACCA ACGTCGCGGC ATTCGGCGCC TTCGCCGATA TCGGTGTGCA TCAGGACGGC
CTGATCCACA TCTCCGCGAT GTCCGAGCGG CGCATCAACG ACCCCCGCGA GGTTGTGAAG
CCGGGCCAGG TGGTGAAGGT GAAGGTTCTG GAGGTCGACG TGCCACGCAA TCGGATCGGG
CTGACCTTGC GGCTTGCCGA TCCGATTCCA GCGGCCGGCG AACGCCGGCA GAGCGGCGGC
GGCGGCAACG CCAAGCTGGT CGAGCGCCAT CGTCCGCGCC CCGAGCCGGC GGGCGGTGGC
GCCCTGGCCG CCGCGCTGGC AAAGGCTGCC GAAAGCAGCA AGAACCGATC GAAGTAA
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| Protein sequence | MPSIRRACGD HIDLLAHPFE RPSVPKIASV IATELAVREE QVQAAIDLLD GGSTVPFIAR
YRKEATGMLD DSQLRTLEER LSYLREMDAR RITIIDSIKQ QGKLTPEIEK ALLAADTKAR
LEDIYLPFKE KRRTKAQIAR EAGLEPLAEM LLLNPDKHPE TEAAAYVKTD GEHPVADVKA
ALEGARSILV ERFSEHADLT GSLREAMWSR GQIKASVRDG KKTSGAKFAD YFDFSEPYEK
LPSHRILALL RGEKEEVLAL DFGDGEDPDS KEPTQYENRI AATFSISRKG RPADSFLSDC
VRWAWRTRIK TGLALDMRMR LWQQAEKEAV RVFAANLRDL LLAAPAGGRA TLGLDPGFRT
GVKVAVIDQT GKFVDHTTIY PHEPARKWNE SMFELAQLCV KHRIELVAIG NGTASRETEK
LVADLMKLKP ELKLTKAIVS EAGASVYSAS EFASKEFPDL DVSIRGAVSI ARRLQDPLGE
LVKVPPQSIG VGQYQHDLNQ YTLSRALDAT VEDCVNAVGV DLNTASAPLL ARVSGIGDTL
ATNIVAHRDA NGPFPSRAKL KEVPRLGPKA FEQCAGFLRI RDGENPLDAS GVHPEAYPLV
KKILAATKSD IKALIGQTSK LKSLQPASFA DDKFGIPTVT DILKELEKPG RDPRPEFKTA
TFQEGVEKIT DLKPGMILEA TITNVAAFGA FADIGVHQDG LIHISAMSER RINDPREVVK
PGQVVKVKVL EVDVPRNRIG LTLRLADPIP AAGERRQSGG GGNAKLVERH RPRPEPAGGG
ALAAALAKAA ESSKNRSK
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