Gene RPD_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2185 
Symbol 
ID4022670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2439785 
End bp2440576 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637962380 
ProductABC transporter related 
Protein accessionYP_569321 
Protein GI91976662 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.839848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCCGATTCGA CGGCGTCTGG AAGGAATATG GCGACCACAT CGTGCTGGAG 
CGCATCACGA TCGATGTGGC GCCACGTGCT TTCGTCGCTT TGGTCGGTCC CTCCGGCTGC
GGCAAGACCA CCTTCCTGCG TATGCTGCTC GGCGAGGAGA CGCCGACCCG CGGCCGCATC
CTGATCGACG GAAAGCCGTT GCGGCCGGAG CCCGACGCCG ACCGCGGCGT GGTGTTCCAG
CGCTATTCGG TGTTTCCGCA TCTCACCGTG TTGCAGAACG TATTACTTGG CCGCGAGCTG
AAAGATTCGA AATGGCTCGG GCGGTTGTTC GGCGGGGCGA AGCGCGCTGC GACAGAGCAG
GCGATGGTGT TGCTTGATGA AGTTGGACTG AAGGGCCACG AGGACAAATA TCCTTCGGCG
CTGTCCGGCG GGATGCAACA GCGACTGGCA TTGGCGCAGG CGATCATGCG CGGGCCGAAA
ATCCTGCTGC TCGATGAGCC GTTCGGCGCG CTCGATCCCG GCATCCGCAG CGAGATCCAC
GAACTGATGA AGCGGCTGTG GAACGAGACC GAACTCACCG TGGTGATGGT GACGCACGAT
CTCAGCGAAG CGTTCCGGCT GGCCAGCCGG GTGGTCGCGT TCGAGCGTCA TCGCAACCGC
CCGGAGGAGC GCGAGCGCTA CGGTGCCACC ATTTCCCGCG ATCTCGAGAT CTATCCGCGG
CGCACGGCGC AGCCGAGGCC GCCGCTTTCG ATCCGCTCCG GCCGGGACGA CCCGGCCGAA
CAGGGAGCAT GA
 
Protein sequence
MSAIRFDGVW KEYGDHIVLE RITIDVAPRA FVALVGPSGC GKTTFLRMLL GEETPTRGRI 
LIDGKPLRPE PDADRGVVFQ RYSVFPHLTV LQNVLLGREL KDSKWLGRLF GGAKRAATEQ
AMVLLDEVGL KGHEDKYPSA LSGGMQQRLA LAQAIMRGPK ILLLDEPFGA LDPGIRSEIH
ELMKRLWNET ELTVVMVTHD LSEAFRLASR VVAFERHRNR PEERERYGAT ISRDLEIYPR
RTAQPRPPLS IRSGRDDPAE QGA