| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2174 |
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| Symbol | |
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| ID | 4022657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2426464 |
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| End bp | 2427186 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637962368 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_569310 |
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| Protein GI | 91976651 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.795683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGC GCGCCTTGGA CGAAACACTT CACTTTGTCG GTAACGTGGA GCGCGCGGAC
ACACCCGACG CCGTCGCGCT GGCGTTGTTG GCCGCCGTGC AGGTTCATGG CTTCTCGCAC
GTGATCGCGG GCGTTATCCC GACTCCCGGC ACATCGGCCA AAGAGCAGAT CGCGAACGTT
GTACTTCATC AATGGCCAGA TGTTTGGAGC CGGCGCTACT TCTCAAAGGG GTATATTTTC
ACCGATCCAG CAATTCGGAG GGTGACGAGC TCTATGGTCC CGTTTTCCTG GACCGAGCTT
TGGGATCACG ATTCGCCGGC AGGCCACCGC ATCCTCGGGG AGGCTGCCGA GTTCGGGCTC
AAGGAGGGCT TCACCGTGCC GATGGTAACG TTGGACGGTC ATTCGGCAGG TCTCTCGATC
GCGGGGGCGA TAACCGAACT GCCGCCGCAC CTCAGAGGGC CAGTGCAGAT GATGGCGATC
TATTCATTCG CCCGCGCCGC GCATCTGAGA GAGCGGCCGC CCGCCCCCGT CACTCTCACG
ATCCGAGAGG CCGACGTCCT TCACTGGATC GCCGAAGGCA AAACCGATTG GGAGATAGCA
CGAATACTTC AGGTGTCGGA ACACCTCGTT GATAAAGTGG CCCGGCAGAT CAAATCGAAA
TTTCAAGTTG TGAATCGGGT CCAGGCGGTC GTTCAAGCGA TGCGAGCCGG CGTGATTCAC
TAA
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| Protein sequence | MSRRALDETL HFVGNVERAD TPDAVALALL AAVQVHGFSH VIAGVIPTPG TSAKEQIANV
VLHQWPDVWS RRYFSKGYIF TDPAIRRVTS SMVPFSWTEL WDHDSPAGHR ILGEAAEFGL
KEGFTVPMVT LDGHSAGLSI AGAITELPPH LRGPVQMMAI YSFARAAHLR ERPPAPVTLT
IREADVLHWI AEGKTDWEIA RILQVSEHLV DKVARQIKSK FQVVNRVQAV VQAMRAGVIH
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