| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2144 |
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| Symbol | |
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| ID | 4022627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2402875 |
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| End bp | 2406087 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637962338 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_569280 |
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| Protein GI | 91976621 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.212316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGA AGTTGCTCGC GTTTTCGGTC CGCCAGCGCT GGTTGGTGAT GATCGGTGTG
CTGATGATGG CAGCGTTCGG TGCCTGGAAT TTTACGCGCC TGCCGATCGA CGCCGTGCCG
GATATCACGA ATGTCCAGGT TCAGATCAAC ACCAACGCGC CGGGGTATTC GCCGCTCGAG
GTCGAGCAGC GGATAACATT TCCGATCGAA ACCGCCATGG GTGGACTGCC GAACCTTGTC
AACACGAGGT CGCTGTCGCG CTACGGGCTA AGCCAAGTCA CGGTGGTGTT CAAGGACGGC
ACCGACATCT ACTTTGCCCG TCAATTGGTG AATGAACGCG TCCAGCGCGT GAAGGACATT
CTGCCGGTCG GCATTGAGAC TGCCATGGGG CCGGTCTCGA CCGGCCTTGG CGAGATCTAT
ATGTACACGG TGGAGGCGAA GGAAGGCGCC AAGAACGCCG AGGGCAAACC GTACACGCCG
AGTGATCTGC GCACCGCGCA GGATTGGATC ATCAAGCCGC AATTGCGCAA CGTCGCCGGC
GTCAACGAGG TCAACACCAT TGGAGGCTTC GAAAAGCAAT TCCACGTCCT TCCCGATCCC
GCGAGGTTGA TGGCGTATCG CCTGAGCTTC CGCGACGTCA TGACGTCGCT CGCGAGCAAT
AACGCGAACG TGGGTGCCGG CTACATTGAA AAGAACGGCG AGCAATACCT GGTAAGGACG
CCGGGGCAGG TCGCAAACGT CGAAGACATC AGGCAGATCG TAATAGGATC GCGTAACGGC
GTCCCGGTCC GCATTATGGA CGTCGCCGAG GTCAAAGAAG GCACTGACCT GCGCACCGGC
GCAGCGACGG TGAGCGGCAA GGAGGTGGTG CTGGGGACGG CGATGCTGCT GATAGGCGAG
AACGGGCGCA CCGTTGCGCA GCGGGTCGCG GCGAAACTCG AGCAAATTCA GAAGTCGCTG
CCCGAAGGGA TCTCGCTGCG CGCGATCTAC GATCGAACCC ATCTAATCGA TGCCACGATC
GCGACCGTCG AGAAGAACTT GATCGAAGGG GCGCTGCTGG TCATCGCAAT TCTGTTCCTG
ATCCTCGGCA ACATCAAGGC GGCGTTCGCC ACCGCGCTTG TCATCCCGCT GTCGATGCTA
TTCACGATCA CGGGAATGTT CGAGAACAAG GTCAGCGCGA ACCTGATGAG CCTGGGCGCC
ATCGATTTCG GCATCATTAT CGACGGCGCG GTCATCATCG TCGAAAACTG TCTGCGGCTG
CTTGCTCATG AGCAGCAGCG GCGCGGCCGT CTGCTCACCC GTGAAGAGCG GTTCGAGACG
ATCATCGCAG GCGCCCGTGA AGTCATCAAG CCGAGCCTGT TCGGTACTCT GATCATCGCA
GTGGTTTACC TGCCCGTGCT GACCCTGACC GGTGTCGAAG GCAAGATGTT CACGCCCATG
GCTTTGACGG TGCTGATGGC ATTGCTCGGC GCTAGTTTAT TGTCGATGAC CTTTGTTCCG
GCCGCGGTCG CGTTGATGGT TACGGGCAAG GTCTCTGAAA AGGAAAATTG GTTCATGCGC
CTCGCGCATC GGACCTACGT GCCACTGCTC GATTTGGCGG TCCGTCTTCG CGTCGTCGTG
GCTGCGGCGG CCGTTGTTCT CGTCATCGTC AGCGGCTACG CCGCCACGCG GATGGGTGGC
GAATTCATAC CCAGCCTCGA CGAAGGTGAC GTGGCTATAC AGGCCATGCG CATCCCCGGA
ACCAGTCTCA CCCAATCTCT CGAAATGCAG ATGGCGCTGG AAAAGCGGCT ACTGGCGATT
CCCGAGGTGA AGGAAGCCTT CGCACGAACG GGTACCGCTG AAGTCGCAAC GGACCCGATG
CCTCCATCGA TCTCCGACGG CTACGTGATG CTGAAGCCGC GCGATCAGTG GCCTGATCCG
AAGAAGCCAA AGCTCGAGGT GATGAAGGAG ATCGAGACGG CTTCCGAGGA GGTGGCGGGC
AACCTCTACG AGCTGTCGCA GCCAATCCAG CTTCGCTTCA ATGAGCTGAT TTCCGGCGTT
CGCAGCGACG TTGGCGTCAA GATATTTGGT GACGATCTCG ATGTCTTGGC GCAGGTAGCG
GCGCAGGTGC AGGCTATACT TCAGACCATC AAGGGGGCTG CCGATGTCAA GACCGAGCAG
GTCGCGGGCC TGCCCGTTCT TACTGTGAAG CTTGATCGGC AGGCGTTGGC GCGTTTCGGC
ATTAATGTTG CCGATGTTCA GAGCCTGGTT GAGATCGCGG TCGGCGGCAA GTCTGCCGGG
TTGGTGTTCG AAGGCGACCG CCGCTTCGAC TTGGTTGTTC GACTGCCTGA TCATCTCCGG
ACTGACGTGG AGGCGATCAA GAGGTTGCCG ATTCCGCTGC CACCGGCGGA TGGGCAGGCG
AAGGCTACTC CGGCCGTTTT CGGTAACTCA CCACTGGCCC AGATGCGCTA TGCGCCGCTG
GCGGAGCTCG CCGAAATTTC AGTCTCGCCT GGGCCGAACC AGATTAGTCG CGAGGATGGC
AAACGGCGTA TCGTGGTGTC TGCCAACGTT CGTGGCCGCG ACCTCGGCTC TTTTGTTGGC
GAGGCCCAGC AACTGGTCGC AGGTAAGGTG AAGCTGCCGG CGGGCTATTG GATCGGGTGG
GGCGGCCAGT TCGAGCAGCT CGTCTCGGCG ACCGAGCGCT TGACCATCGT GGTTCCGATC
GCGCTGCTGC TGATCTTCTT GCTGCTGTTC ATCAGCCTTG GTTCGGCGGC CGATGCCCTT
TTGGTATTCA GCGGAGTACC GCTGGCGCTA ACCGGGGGCA TTTTCGCGCT CCTGTTGCGA
GGCATCCCGC TTTCGATCAG TGCCGGAATC GGCTTCATCG CCCTTTCGGG GGTTGCCGTG
CTCAACGGTC TTGTCATCAT TACCTTCATT GAGCGTTTGC GTGGCGATGG ACGTAAGATC
GTCGATGCCG TTCGTGAGGG CGCGCTAACC CGCCTGCGAC CGGTGCTGAT GACGGCGTTG
GTCGCCTCTC TTGGTTTTGT ACCAATGGCA CTTGCCACCG GCGCTGGCGC TGAGGTGCAA
CGGCCGCTGG CTACTGTGGT GATCGGCGGC ATCGTGTCGT CGACTATTCT TACGCTTCTC
GTCCTTCCGG CGCTCTACAT CCTGTTCCGC CGCGAAGCCT CGCCAGCCGA GTTGGCGGCG
AGTTCTGTTC CTACAAAACA AGGAGATCAT TGA
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| Protein sequence | MIEKLLAFSV RQRWLVMIGV LMMAAFGAWN FTRLPIDAVP DITNVQVQIN TNAPGYSPLE
VEQRITFPIE TAMGGLPNLV NTRSLSRYGL SQVTVVFKDG TDIYFARQLV NERVQRVKDI
LPVGIETAMG PVSTGLGEIY MYTVEAKEGA KNAEGKPYTP SDLRTAQDWI IKPQLRNVAG
VNEVNTIGGF EKQFHVLPDP ARLMAYRLSF RDVMTSLASN NANVGAGYIE KNGEQYLVRT
PGQVANVEDI RQIVIGSRNG VPVRIMDVAE VKEGTDLRTG AATVSGKEVV LGTAMLLIGE
NGRTVAQRVA AKLEQIQKSL PEGISLRAIY DRTHLIDATI ATVEKNLIEG ALLVIAILFL
ILGNIKAAFA TALVIPLSML FTITGMFENK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAHEQQRRGR LLTREERFET IIAGAREVIK PSLFGTLIIA VVYLPVLTLT GVEGKMFTPM
ALTVLMALLG ASLLSMTFVP AAVALMVTGK VSEKENWFMR LAHRTYVPLL DLAVRLRVVV
AAAAVVLVIV SGYAATRMGG EFIPSLDEGD VAIQAMRIPG TSLTQSLEMQ MALEKRLLAI
PEVKEAFART GTAEVATDPM PPSISDGYVM LKPRDQWPDP KKPKLEVMKE IETASEEVAG
NLYELSQPIQ LRFNELISGV RSDVGVKIFG DDLDVLAQVA AQVQAILQTI KGAADVKTEQ
VAGLPVLTVK LDRQALARFG INVADVQSLV EIAVGGKSAG LVFEGDRRFD LVVRLPDHLR
TDVEAIKRLP IPLPPADGQA KATPAVFGNS PLAQMRYAPL AELAEISVSP GPNQISREDG
KRRIVVSANV RGRDLGSFVG EAQQLVAGKV KLPAGYWIGW GGQFEQLVSA TERLTIVVPI
ALLLIFLLLF ISLGSAADAL LVFSGVPLAL TGGIFALLLR GIPLSISAGI GFIALSGVAV
LNGLVIITFI ERLRGDGRKI VDAVREGALT RLRPVLMTAL VASLGFVPMA LATGAGAEVQ
RPLATVVIGG IVSSTILTLL VLPALYILFR REASPAELAA SSVPTKQGDH
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