| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2113 |
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| Symbol | |
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| ID | 4022595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2365345 |
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| End bp | 2366349 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962306 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_569249 |
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| Protein GI | 91976590 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.369311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGC TGATTCTGTC CGCGGCGTCG GCCGCAATGC TTGCCCTGGC CGGGCCGGCA
GCAGCACAAT CACCGATCGT CATCAAGTTC AGCCATGTCG TGGCGCCGAA CACGCCGAAG
GGACTGGCGG CGGAGAAGTT CAAAGAGCTC GCGGATAAGT ACACCGAGGG TAAGGTCAAG
GTCGAAGTCT ATCCGAACTC CCAGCTCTAC AAGGACAAGG AAGAACTCGA CGCACTGCAG
CTCGGCGCGG TGCAGATGCT GGCACCGTCG ATCTCGAAGT TTGGTCCGGC GGGGGTCAAG
GAATTCGAGG TATTCGATCT TCCCTACATC CTTCCGGACA TCGCGGCGCT GCGCAAGGTG
ACCACCGGTC CGGTCGGCAC CAAGCTGTTC AAGCTGCTCG ACGCCAAGGG CATGACCGGT
CTCGCCTATT GGGACAACGG CTTCAAGATC ATGAGCGCCA ACAAGAAGCT CGTGACTCCC
GAGGACTACA AGGGCCTCAA GTTCCGGATC CAGTCCTCGA AGGTGCTCGA CGCCCAGTTC
CGCTCGCTCG GCGCGATCCC GCAGGTGATG GCGTTCTCGG AAGTGTACCA GGCGCTGCAG
ACCGGCGTGG TCGACGGACA GGAGAACACG CCGTCGAACA TGTACACGCA GAAGATGCAC
GAAGTGCAGA AGTACACCAC CCTGACCAAT CACGGCTATA TCGGCTACGC GGTGATCGTG
AACAAGAAGT TCTGGGACGG TATCCCGGCC GAAATCCGCA CCCAACTCGA CAAGGCGATG
GTCGAGGCCA CCGACTTCGG CAACAGCCAG TCGCAGAAGG AAAACGACGA CGCGCTGGCG
GAAATGAAGA AGTCCGGCAA GACCGAGCTG ATCACGCTGA CGCCGGAGCA GAACTCGGCG
ATGCGCAAGG CGATGGCGCC GGTCTATGAC GACGTCTCGG GGCGCATCGG CAAGGGGCTC
ATCGAAGAGT TCCTGAAAGA GAGCGGCGGC GGTCCGACGA AGTAG
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| Protein sequence | MRKLILSAAS AAMLALAGPA AAQSPIVIKF SHVVAPNTPK GLAAEKFKEL ADKYTEGKVK
VEVYPNSQLY KDKEELDALQ LGAVQMLAPS ISKFGPAGVK EFEVFDLPYI LPDIAALRKV
TTGPVGTKLF KLLDAKGMTG LAYWDNGFKI MSANKKLVTP EDYKGLKFRI QSSKVLDAQF
RSLGAIPQVM AFSEVYQALQ TGVVDGQENT PSNMYTQKMH EVQKYTTLTN HGYIGYAVIV
NKKFWDGIPA EIRTQLDKAM VEATDFGNSQ SQKENDDALA EMKKSGKTEL ITLTPEQNSA
MRKAMAPVYD DVSGRIGKGL IEEFLKESGG GPTK
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