| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2112 |
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| Symbol | |
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| ID | 4022594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2363594 |
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| End bp | 2365168 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962305 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_569248 |
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| Protein GI | 91976589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCCCGAAGTC CGAGCAGGAC CGCGTCATCA TTTTCGACAC CACCTTGCGC
GACGGCGAGC AGTGCCCCGG CGCCACCATG ACCTTCGAGG AGAAGCTGAA CGTCGCCGCG
ATGCTCGACG AGATGGGCGT CGACGTGATC GAGGCGGGCT ATCCGTTCGC CTCTGACGGC
GACTTCGAGG CGGTGCACGA GATCGCCAAG CGCTCGAAGA ATTCGGTGAT CTGCGGATTG
TCACGGGCCG CGCACAAGGA CATCGACCGC TGCGCCGAGG CGATCAAGCC GGCGGAGCGC
GGCCGCATCC ACACCTTCCT GTCCACCTCG CCGGTGCACA TGAAGTACAA GCTGCAGATG
GAGGCCGCGC AGGTCTACGA GATGGTGATC TCGTCAGTGA CGCGCGCCCG CAACCACACC
GACGACGTCG AGTGGTCGGC CGAGGACGCC ACCCGCACCG AGTTCGACTT CCTGTGCCGC
TGCATCGAGG CCGCGATCAA GGCCGGCGCC ACCACCATCA ACCTGCCTGA CACAGTCGGC
TATGCGGTGC CCGAGGAATA TCGCGAAATG TTCCGCAAGG TGCGTGAGAC CGTGCCGAAC
GCCGACAAGG CGAGGTTCTC GGTGCACTGT CACGACGACC TCGGCATGGC GGTGGCGAAT
TCGATCGCGG GCGTGCAGGG TGGGGCGCGT CAGATCGAAT GCACCATCAA CGGCATCGGC
GAGCGCGCCG GCAATGCCGC GCTGGAAGAA GTGGTGATGG CGATGCGGGT GCGGCAGGAC
AAGGTGCCGT ACTGGAATAG GATCGAAAGC AAGATGCTGA CGCACGCCTC GAAGACGGTG
TCGGCGGCGA CCTCGTTCCC GGTGCAGTAC AACAAGGCGA TCGTCGGCCG CAACGCATTC
GCGCACGAGA GCGGCATCCA CCAGGACGGC ATGATCAAGA ACGCCCAGAC CTACGAGATC
ATGACGCCGG AGACGGTGGG CGTGAAGGGC ACCTCGCTGG TGATGGGCAA GCACTCCGGT
CGCGCCGGTC TGATCCACAA GATGGAAGAG CTGGGCTACA AGCTGTCACG GAACCAGATC
GAGGATGTGT TCGTGCGGTT CAAGGCGTTG GCCGACCGCA AGAAGGACGT CTACGACGAA
GACATCGAGG CGTTGGTCGA CGAGCAGTTG CTGCATGGTC AGGACCTGAT CCGGCTGAAG
TCGCTGACGG TGATCGCCGG TACCCACGGC CCGCAGCGCG CGACCATGAA GATCGACGTG
GACGGCCAGC TCCGGATCGA GGAAGCCGAA GGCAACGGTC CGGTGGATGC GGTGTTCAAC
TGCATCAAGG CCCTGGTGCC GCACGACGCC AAGCTCGAGT TGTACCAGGT ACATGCCGTC
ACCGAAGGGA CCGACGCGCA GGCCGAAGTC TCGGTGCGGC TGTCGCATGA GGGCCGTTCG
ATGACGGCCC GCGCCGCCGA CCCCGATACG CTGGTCGCGT CGGCGAAAGC CTATCTCGGC
GCGCTGAATA AGATTGTCGC CAAGCGTCAG CGCGACGTCC GTCAAGACGC GCCCGCAGTC
GCGGTGGCCG GCTGA
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| Protein sequence | MTTTPKSEQD RVIIFDTTLR DGEQCPGATM TFEEKLNVAA MLDEMGVDVI EAGYPFASDG
DFEAVHEIAK RSKNSVICGL SRAAHKDIDR CAEAIKPAER GRIHTFLSTS PVHMKYKLQM
EAAQVYEMVI SSVTRARNHT DDVEWSAEDA TRTEFDFLCR CIEAAIKAGA TTINLPDTVG
YAVPEEYREM FRKVRETVPN ADKARFSVHC HDDLGMAVAN SIAGVQGGAR QIECTINGIG
ERAGNAALEE VVMAMRVRQD KVPYWNRIES KMLTHASKTV SAATSFPVQY NKAIVGRNAF
AHESGIHQDG MIKNAQTYEI MTPETVGVKG TSLVMGKHSG RAGLIHKMEE LGYKLSRNQI
EDVFVRFKAL ADRKKDVYDE DIEALVDEQL LHGQDLIRLK SLTVIAGTHG PQRATMKIDV
DGQLRIEEAE GNGPVDAVFN CIKALVPHDA KLELYQVHAV TEGTDAQAEV SVRLSHEGRS
MTARAADPDT LVASAKAYLG ALNKIVAKRQ RDVRQDAPAV AVAG
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