Gene RPD_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2089 
Symbol 
ID4022571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2340702 
End bp2341175 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID637962282 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_569225 
Protein GI91976566 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG AATATTTCCA TCTGATTGAT CGGATCGCCG ACCTTCGTCT CGAGCAGCGC 
AGCATCACGG TCGAAGCGCG AGTGCCCGAA AAGAGCACCA TCTTCGAGGG TCATTTTCCC
GGCTATCCTT TGATGCCGGG CGTGCTGCTG ATCGAGACGA TGGCGCAGAC CTCAGGCTGG
TTGCTGATCG CGCTGATGCA GTTCCAGCGC ATGCCGTTCC TGGCCGCGGT CAAGGAAGCC
AAGATGCGCA GCTTCGTCAC GCCGGGCGAG ACGCTGTCGG TCGAGGCATC GGTGATCCAT
GAGGGTTCGG GCTACACCAT GACCGAAGCG AAGATCAAAA GCGGCGGCAA GCTGGCGTGC
AACGCGACGC TGACCTTCCG CCATGTGCCC TTCCCCAACC CGGATTTGCG CGGGCACATG
GAAGCGATGG CCAAGCAGAT TGGATTTCCG GAGCAGATGA TCACCCATGA CTGA
 
Protein sequence
MNLEYFHLID RIADLRLEQR SITVEARVPE KSTIFEGHFP GYPLMPGVLL IETMAQTSGW 
LLIALMQFQR MPFLAAVKEA KMRSFVTPGE TLSVEASVIH EGSGYTMTEA KIKSGGKLAC
NATLTFRHVP FPNPDLRGHM EAMAKQIGFP EQMITHD