Gene RPD_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2086 
Symbol 
ID4022568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2337120 
End bp2338142 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID637962279 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_569222 
Protein GI91976563 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC TCACTCTCGT TGCCGATCGC GATCTCGCGG TCTCCGATCT ACCGCCGCCC 
CCGCCGCCTG CGGCCGGCGA GGTGCAGATC CGCGTCGCCG CGGTCGCGCT CAACCACATC
GACGTCTGGG GCTATCGCGG CATGGCCTTC GTCAAGCGCA AGCTGCCGAT CGTGGTTGGC
GCAGAAGCGT CGGGCACGAT CGAGGCGGTC GGCGACGGCG TGACCCGATT CACGCCCGGC
CAGAAGGTCG TGATGTACGG CGCGCTGACC TGCGGCCACT GCAAGGCGTG CCTCGAAGGC
CGCGATAATT TCTGCGAGAA TGTCGGCGGA CTGATCGGCT TCCACGTCGA CGGCTTCGCG
CGCGAACTGA TGAACATCCC TGCTCGGCTG GTGATTCCGG TCCCGGACGG CGTGAGCCTG
CGCGACGCCG CCTGCGCGCC GATCGCGTTC TCCACCGTGC AGCACATGCT GTTCGACAAC
GCCAAGCTGC AGCCGGGAGA GACCATTCTG GTGCACGCCG GCGGCTCCGG CATCGGCACC
GTCGCGATCA TGATGGCGAA AGCGATCGGC TGCACCGTGA TCACCACGGT CGGCGACGAC
AGCAAGATCG AAGGCGTCAA GAAGCTCGGC GCGGACTACG TCATCAACTA TCGAAACGAC
CGCTTCGAGC ACGAGACGCG AAAGATCACC AAGAAGAAGG GCGTCGACGT CGTATTCGAA
CACGTCGGCG CCGACACGTT CAACGGCTCG CTGCTGGTGA TGAAGCGCGG CGGTCGCCTC
GTGACCTGCG GCTCGACCTC CGGCCCGACC GCGACCATCA ACTTGATGCA GCTGTTCCAG
CAGCAGTACC GCATCTTCGG CTCGTTCGGC GCGACGATGA CGAACATCGC CGAAAGCCTC
GACAAGATGG CGGCCGGGAT GCTGCCGGTG ATCGACACGG AAGTATCGCT CGACGACGTC
GGCGCCGCGC TGAAGCGGAT GGAAAGCCGC CAGGTGTTCG GCAAGATCAT CGTTCACTTC
TGA
 
Protein sequence
MRALTLVADR DLAVSDLPPP PPPAAGEVQI RVAAVALNHI DVWGYRGMAF VKRKLPIVVG 
AEASGTIEAV GDGVTRFTPG QKVVMYGALT CGHCKACLEG RDNFCENVGG LIGFHVDGFA
RELMNIPARL VIPVPDGVSL RDAACAPIAF STVQHMLFDN AKLQPGETIL VHAGGSGIGT
VAIMMAKAIG CTVITTVGDD SKIEGVKKLG ADYVINYRND RFEHETRKIT KKKGVDVVFE
HVGADTFNGS LLVMKRGGRL VTCGSTSGPT ATINLMQLFQ QQYRIFGSFG ATMTNIAESL
DKMAAGMLPV IDTEVSLDDV GAALKRMESR QVFGKIIVHF