| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2079 |
|---|
| Symbol | |
|---|
| ID | 4022561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2329001 |
|---|
| End bp | 2329822 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637962272 |
|---|
| Product | OmpA/MotB |
|---|
| Protein accession | YP_569215 |
|---|
| Protein GI | 91976556 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.299736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA AGAAGCGTGA GGAAGCACAC GGCGGTCACG GCTGGTTCGT GACCTTCGCC
GACTTGATGG CGCTGCTTCT CGCGTTCTTC GTGATGCTCG TCGCTTTCTC CACCCAGGAC
AAAGACAAGC TCAAAATCGT CGCGGGCTCG ATGCGTGAAG CGTTCGGCGT ACAAAACGAC
TCGCGCTACT CAGGCATCAT CGAGAACGAC GGTCTGCCGA CCCGCGGCAA GGTCAAGAAC
ACCGAACACG TCAATCCGGA ATTGTCGACC AGTAAGCCCG CGCCTGGCGA AGTGACCCGC
GACGAGGGGG TCAACACCAA GGAGGAACGT GAATTCGCGT TGGCCTCCGC ATCGCTGCGG
CAAGCGCTGC AGGACTTGCC GGAGATTTCC GAACTGTCCA AGAACGTGAT GTTCGAAGAG
ACCAAGCAGG GACTCAACCT CGAGATCATG GACCAGGACG GGCGCGCGAT GTTCGCTGAC
GGCTCCAAGG CGCCGTTCGA GCGTACGCGG CTGTTGCTAC AGCGACTAGC AGCGCCGCTC
CGCGCGACGC CGTTGCGGGT CAGCATCGTC GGGCACACAT CGGCGGGATC GGTGTCGCAG
CGGAGCGACT ATAACGGCTT CGACCTGTCC GCCGATCGCG CCAATGTGGT ACGGCAGATT
CTCGAACGGG AAGGCCTGCC GGTTTCACAT ATCTTCGCTG TGACCGGAAA GGCGGACACC
CAGCCGCTGT TTCCGGAAGA TCCCTCGATC GCCGCAAATC GGCGGGTGAC CATCACGCTG
ATGCGCGAGA GCCCGGCATT GCCGCCGGGC CTCAAGCCCT AA
|
|---|
| Protein sequence | MAKKKREEAH GGHGWFVTFA DLMALLLAFF VMLVAFSTQD KDKLKIVAGS MREAFGVQND
SRYSGIIEND GLPTRGKVKN TEHVNPELST SKPAPGEVTR DEGVNTKEER EFALASASLR
QALQDLPEIS ELSKNVMFEE TKQGLNLEIM DQDGRAMFAD GSKAPFERTR LLLQRLAAPL
RATPLRVSIV GHTSAGSVSQ RSDYNGFDLS ADRANVVRQI LEREGLPVSH IFAVTGKADT
QPLFPEDPSI AANRRVTITL MRESPALPPG LKP
|
|---|
| |