Gene RPD_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2065 
SymbolcysS 
ID4022547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2313085 
End bp2314476 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID637962258 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_569201 
Protein GI91976542 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.680985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.870381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC GCCTCTACGA TACGCTGACC AAGGAGAAGC GCGACTTCGC GCCGCTCGAT 
CCCTCGCGTG TGCGGATGTA TGTCTGCGGC CCGACGGTCT ACGACTTCGC CCATATCGGC
AATGCGCGGC CGGTGATCGT GTTCGACGTG TTGTTCCGGC TGCTCCGGCA TCTCTACGGC
GAGAACCACG TCAAATACGT CCGCAACATC ACCGACGTCG ACGACAAGAT CAACGACCGC
GCCGCGCGTG ACTATCCCGG CCTGCCGCTG AACGAGTCGA TCCGTAAGGT CACCGAGCAG
ACCGAGCGGC AATTCCACGA CGACGTCGAT GCGCTGGGCT GCCTGCGGCC GACCGTCGAG
CCGCGCGCGA CCGAGCATAT CGGCGAGATG CGGACGATCA TCGACCGGCT TGTCGAAGGC
GGCTTCGCTT ATGTCGCCGA TGATCACGTG CTGTTTTCGC CCGGCGCGAT GAACGCCGCC
GATAGCGTGC TGCCGCGCTA CGGCGCGCTC GCCAATCGCT CGCTCGACGA AATGATCGCC
GGCGCCCGCG TTGACGTTGC GCCCTACAAG CGCGACGCCA CCGACTTCGT GCTGTGGAAG
CCGTCGAAGC CCGGCGAGCC GTCCTGGCCG TCGCCGGCCG GCATCGCGAC GCAGGGCCGG
CCCGGTTGGC ACATCGAATG CTCCGCGATG TCGTGGAAGC ATCTGGGCGA AACCTTCGAC
ATCCACGGCG GCGGCATCGA CCTGGTGTTT CCGCATCACG AGAACGAAGT GGCGCAGTCG
TGCTGCGCTT TTCACACCTC GCGCATGGCC CAGACCTGGA TGCACAACGG CTTCCTGCAG
GTCGAAGGCG AGAAGATGTC GAAGAGCCTG GGGAATTTCG TCACGATCCG GGAATTGCTG
GCGACGGAGA AATTCGGCGG GCGCAAGTGG GACGGAGCTA CGCTGCGTCT CGCAATGCTG
AAAACGCATT ATCGGCAGCC GATCGATTGG ACCGCCGATG CGCTGCACGA GGCTGAGAAG
GCGATTTTCG ATTGGTCCGA CTTCACCAAA GACGCGACGC CCGGGTCTTG CGACGACGTC
ATCGCCGCGC TGACCGACGA CCTCAATACG CCCAAGATGA TCGCTGAATT GCACGCGCTG
CGTCGCGCGG GCAAGGCCGA TGAATTGTGC GGCGCCATGG AGCTGCTCGG CATTTCACCT
GTCGTTCGCG GCACGGTCGA TCTCGATGCG ACGGCGAAGT CGCTGATCGA TGCACGCACC
GCCGCCCGTG CGCGAAAAGA CTTCAAGGAG TCCGATCGCA TCCGCGATGA ACTTGCCGCG
ATGGGCATCG CGATCAAGGA CGGCAAGGAT TCAGACGGCA AGCCGGTGAC GACCTGGGAG
ATCGCCCGAT GA
 
Protein sequence
MALRLYDTLT KEKRDFAPLD PSRVRMYVCG PTVYDFAHIG NARPVIVFDV LFRLLRHLYG 
ENHVKYVRNI TDVDDKINDR AARDYPGLPL NESIRKVTEQ TERQFHDDVD ALGCLRPTVE
PRATEHIGEM RTIIDRLVEG GFAYVADDHV LFSPGAMNAA DSVLPRYGAL ANRSLDEMIA
GARVDVAPYK RDATDFVLWK PSKPGEPSWP SPAGIATQGR PGWHIECSAM SWKHLGETFD
IHGGGIDLVF PHHENEVAQS CCAFHTSRMA QTWMHNGFLQ VEGEKMSKSL GNFVTIRELL
ATEKFGGRKW DGATLRLAML KTHYRQPIDW TADALHEAEK AIFDWSDFTK DATPGSCDDV
IAALTDDLNT PKMIAELHAL RRAGKADELC GAMELLGISP VVRGTVDLDA TAKSLIDART
AARARKDFKE SDRIRDELAA MGIAIKDGKD SDGKPVTTWE IAR