Gene RPD_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1955 
Symbol 
ID4022437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2195061 
End bp2195570 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID637962148 
Producthypothetical protein 
Protein accessionYP_569091 
Protein GI91976432 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.389747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGC CGCAAAAAAT CTCCGACCAG GACGGTTTCT TCTGGAAAAC CAAAACGTTG 
GAAGAGATGT CCGCGGCCGA GTGGGAGAGC CTGTGCGACG GCTGCGCGCG CTGCTGCCTG
GAGAAGCTCG AGGACGAGGA CACCGGGCGG ATCTATTTCA CCCATGTCGG CTGCCGGCTG
CTCGATGGCC AGTCGTGCGG GTGCCGGGAC TATGCGAATC GGTCGGACCG GGTGCCGGAC
TGCGTCCGGC TCTCGCCGGA GAATGTCCGC ACGCTGAGCT GGCTGCCGCC GAGCTGCGGC
TATCGCCTCG TCGCCGAGGG GCGCGATCTG TATTGGTGGC ATCCGCTGAT CTCCGGCGAC
CCGAACACGG TCCATGACGC CGGCGTCTCG GTGCGCGGGC GGGTCGAGGC GAGCGAATCG
GAGATTCCGG TCGAGGACCT CGAAGACCAC ATCGTGTCGT GGCCGGCGCT GCTGCCGCGG
CGCGCCAAGC TGAAGAAGCG GCCGGCGTGA
 
Protein sequence
MTKPQKISDQ DGFFWKTKTL EEMSAAEWES LCDGCARCCL EKLEDEDTGR IYFTHVGCRL 
LDGQSCGCRD YANRSDRVPD CVRLSPENVR TLSWLPPSCG YRLVAEGRDL YWWHPLISGD
PNTVHDAGVS VRGRVEASES EIPVEDLEDH IVSWPALLPR RAKLKKRPA