| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1954 |
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| Symbol | |
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| ID | 4022436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2193043 |
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| End bp | 2195064 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962147 |
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| Product | ATPase |
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| Protein accession | YP_569090 |
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| Protein GI | 91976431 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.342143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.310254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC TCGGCATCGC CATCTACGAC CCGCGTCGGC TCGATCCCGA AACCTTCCTC
AAAGGTTTCG TGGCGCGGGG CGATTTCGTC GACTTCCTGC TCGACAAGCT TCGCCAGATG
CCGGAGATCG GCGAGCATTT TCTGATCGTC GGCCCGCGCG GCATTGGCAA GACCAGCCTG
CTGCGGCGTC TCGCGATCGG GATCTCGGAG GAGCCCGCCC TGCGCGCGCG CTTCATTCCG
CTGAGTTTTC GCGAGGAGCA GTACAATGTC CGCGCGCTCG ATGCGTTCTG GAGAAACTGC
GCCGAGTCGC TCGCCGAATG GTGCGAGGAT CAAGGCCGGC AGGAGATCGC CGACGATATC
GACCGCAGCC TGCCGAGCGC GGAATGGCAT GAGTCGAACT CCGCGGTTCA GGCTTTCCTC
GCTCTCTGCA AGCGGCTCGG CGGCCGGCCG GTGCTGTTCG TCGACAATCT CGATCTGATC
CTCGACGCGC TGTCGCCGCA GCAGAACTGG GAGCTGCGGC GCACGCTGCA GGCACCCGGC
GGACCGATCG TATTCGGCGC CGCCACGCAG ATGCTGCGGC AGAGCGCCGA CCGCGACGCG
GCGTTCTACG AGTTCTTTCA CCCGCACATG TTGCATCCGC TCTCCGAAAG CGAGTTGCGG
CACTGCATGT CCCGGCTGGC GCAGGCGCGC GGCGATTTGG GCAAGCCGGT CCTCGATGTG
CTCGACCGCG AGCCGGAACG CATCCGCACG CTGCACAATC TGACCGGCGG CAATCCGCGG
GTGCTGACGC TGGTCTATCA ATTGCTCGAG CGCACCGAGA GCGACAGCGT GTTCCGCGAT
CTCGAAGTGC TGCTCGATCA GTTGACGCCC TATTACAAGG CGCGGGTCGA GGATTACCAG
ACCGATCTGC AGCGCGCGGT GATCGACGCC ATCGCACTGC ACTGGCATCC GATCACGTCG
AGCCGCCTGA GCGACATCAC CGCGGTCGAG GTCACCACGA TCTCGTCGCA GCTCAATCGG
CTGAAGAATG ACGGGCTGAT CGAGGAGGTC GAGACTTCCG GCGCGCGCGC CGGCTATCAG
CTCGTCGAGC GGTTCTTCAA CATCTGGTAT TTGATGCGAC ACGGCACCCG CCGTACCCGG
CAGAAGATCG CCTGGCTGAC GGAGTTCTTG AGCAGTTTCT ATGCACCGGC CGAGCTGATG
AAGATGAAGG CTGAGCTGAT CGCCGGCGGG AGCGCGTCGC TGCATCCGCT CTATCGCGAG
GCGCTGGAGG CGGCCGGTGA GGAGAGTGGG AGGTTGGCGC GGGCTGCAGT GCCAGAGCCC
TCTGTCGAGA CATCGCAATT GGGGAGGTCG AGCGATCTGT TTAGAGAGGC GGAGCACATT
GTCCGCCATT GGGTCGAGCG CGATCAGACG AATTATGACG GTTGGTCCTT GCTCGGTAGT
ATCCTTGCAG ACCATTCTGG ACATCCCGCC GAAGCTGAGG CTGCTTATCG GAAGGCAATG
ACGATCTCCG GCGATCGAGT GATCGCAGAG GCCAATCTGG CGTGGCTACT TTTCGCCTCG
GGTCGGTTGT CGGAAGCAGC CTCGCTCGAA TCCGCGCTGA CCAAGCTCGA TCCGGTCGGC
CGCGCGCTGC TCGATGCGGC GCGCGCGCTC GTGCAAGACA ATTTCGGCGA CACGACGGGG
CATTTGCAGC AGGCGTTGAA CAGCGATCTG GTGCAACTGA ACGCGACCTT CTCCGACGAT
CTTCTCCGGC TGCTCCGGAT CGCGGCGCAG CGCGGCTATG GCGAGAAGCT GATCGAATGG
TTCAACCAGT CCGGGCAGGC GGATCGGCGG GCGCCGGTCT ATGCGGCCCT CGTCGCTTTC
GTGCGCGGCG AACGGTTCCT GCTGGACTTC AGCCCGGAGA TCCGTAAACC GGCCGAGTCG
ATTTTCCGCT GGCTGAACTC GCGTTCGGAC AGATCCCCAT CAACTCCCGA CAAGCCCGCG
CGGAAACGTG GCAGGCCGCC GCGCAAACGC CAGACCGCAT GA
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| Protein sequence | MSNLGIAIYD PRRLDPETFL KGFVARGDFV DFLLDKLRQM PEIGEHFLIV GPRGIGKTSL
LRRLAIGISE EPALRARFIP LSFREEQYNV RALDAFWRNC AESLAEWCED QGRQEIADDI
DRSLPSAEWH ESNSAVQAFL ALCKRLGGRP VLFVDNLDLI LDALSPQQNW ELRRTLQAPG
GPIVFGAATQ MLRQSADRDA AFYEFFHPHM LHPLSESELR HCMSRLAQAR GDLGKPVLDV
LDREPERIRT LHNLTGGNPR VLTLVYQLLE RTESDSVFRD LEVLLDQLTP YYKARVEDYQ
TDLQRAVIDA IALHWHPITS SRLSDITAVE VTTISSQLNR LKNDGLIEEV ETSGARAGYQ
LVERFFNIWY LMRHGTRRTR QKIAWLTEFL SSFYAPAELM KMKAELIAGG SASLHPLYRE
ALEAAGEESG RLARAAVPEP SVETSQLGRS SDLFREAEHI VRHWVERDQT NYDGWSLLGS
ILADHSGHPA EAEAAYRKAM TISGDRVIAE ANLAWLLFAS GRLSEAASLE SALTKLDPVG
RALLDAARAL VQDNFGDTTG HLQQALNSDL VQLNATFSDD LLRLLRIAAQ RGYGEKLIEW
FNQSGQADRR APVYAALVAF VRGERFLLDF SPEIRKPAES IFRWLNSRSD RSPSTPDKPA
RKRGRPPRKR QTA
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