| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1937 |
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| Symbol | |
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| ID | 4022419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2175443 |
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| End bp | 2176849 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962130 |
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| Product | hypothetical protein |
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| Protein accession | YP_569073 |
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| Protein GI | 91976414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.293644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.311555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA CTTCGCAGCT ACAAGCGGTG CTCGATCGCG CCGACGCCGA TTTTGATCAC
GCGCTGGAGC GGCTGTTCGC GCTGCTGCGG ATCAAGTCGA TCTCCGCCGA TCCGGCGTTC
GCCGCCGACT GCAAGGCGGC CGCTACGCAT CTGGCTGCCG ACCTCGCCTC GATCGGCTTC
GACGCCGAAG TGAAGCCGAC CGCGGGCCAT CCGGCGATCG TCGCCAAGGC CAAGGGCAAT
ACCGGGAAGC GGCCACATGC GTTGTTCTAC GGCCACTACG ACGTGCAGCC GGTCGATCCG
CTTGCGCTGT GGCATCGTCC GCCGTTCGAG CCGGTGGTGA CTGATCACGC CGACGGTCGC
AAGATCATCG TCGCGCGCGG CGCGCAGGAC GACAAAGGCC AGCTTTCCAC CTTCGTCGAG
GCCTGCCGGG CGTGGAAGAG CGTCACCGGC GAACTGCCGA TCGACCTCAC CATCGTCATC
GAAGGCGAGG AGGAGGTCGG CTCGAAGAAC TTCGTGCCGT TCCTCGAGAC CAACAAGCAG
GACCTCGCCG CCGACTTCGC GCTGGTGTGC GACACCGGCA TGTGGGACCC GTCGACGCCG
GCGATCACCA CCTCGCTGCG CGGGCTCGTC TACGAGGAAG TGAAGATCAA AGCCGCCAAC
CGCGATCTGC ACTCCGGCGT CTATGGTGGC GGCGCGCAAA ATCCGATCCG CGTGCTGACG
CGGATTCTCG GCGGGTTGCA TGATGAGCAC GGCCGCATCA CCATTCCCGG CTTCTACGAC
GGCGTAAAGG ATCTGCCGCC GGACATTCTG GCGCAGTGGA AGGGCCTCAA CCTCACCGCC
GACAGTTTCC TGAAGCCGAT CGGCCTGTCG CTTCCGGCGG GCGAGGACGA TCGGCTGTTG
ATCGAACAGA TTTCATCGCG ACCGACCTGC GATATCAACG GCATCGTCGG CGGCTACACC
GGCGAGGGCT CGAAGACGGT GATCGCGGCG GAGGCCTCCG CAAAGGTGTC GTTCCGGATC
GTCGAGGGCC AGGACCCGAA GAAGATCCGC GACGCCTTCC GCGCGTTCGT CACGGCGCGG
CTGCCGGGCG ACTGCCGCGC CGAGTTCATC GATCACTCCA ACGCCCCCGC GATCGCGCTC
GACTGGAACA TGAAGCCGCT GGCGGCGGCA AAGCGCGCGC TGACAGAGGA GTGGGGCAAG
GACGCGCTGC TGATCGGCTC CGGCGCTTCG ATTCCGATCG TCGCCGATTT CAAGCGCACG
CTCGGCATCG ACAGCGTGTT GATCGGCTTC GGCCTCGACG ACGACAACAT CCATTCGCCG
AACGAGAAGT ACGACCTGCG CAGCTTCCAG AAGGGCATCC GTTCCTGGGT GCGGATTCTG
GCGGCGCTGG CCGAGAGGGC GAAGTAG
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| Protein sequence | MPATSQLQAV LDRADADFDH ALERLFALLR IKSISADPAF AADCKAAATH LAADLASIGF
DAEVKPTAGH PAIVAKAKGN TGKRPHALFY GHYDVQPVDP LALWHRPPFE PVVTDHADGR
KIIVARGAQD DKGQLSTFVE ACRAWKSVTG ELPIDLTIVI EGEEEVGSKN FVPFLETNKQ
DLAADFALVC DTGMWDPSTP AITTSLRGLV YEEVKIKAAN RDLHSGVYGG GAQNPIRVLT
RILGGLHDEH GRITIPGFYD GVKDLPPDIL AQWKGLNLTA DSFLKPIGLS LPAGEDDRLL
IEQISSRPTC DINGIVGGYT GEGSKTVIAA EASAKVSFRI VEGQDPKKIR DAFRAFVTAR
LPGDCRAEFI DHSNAPAIAL DWNMKPLAAA KRALTEEWGK DALLIGSGAS IPIVADFKRT
LGIDSVLIGF GLDDDNIHSP NEKYDLRSFQ KGIRSWVRIL AALAERAK
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