Gene RPD_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1935 
Symbol 
ID4022417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2173112 
End bp2173495 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content64% 
IMG OID637962128 
Producthypothetical protein 
Protein accessionYP_569071 
Protein GI91976412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.624995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGT TGATTGAACG GCTGGCCGAC AAGGCCGGCC TGGACAAAGC CGTTGCTGGC 
AAAAGCGTCG GCATCATCCT CGGCTTTCTC CGCAACGAGG GTCCGCAAGA ACCCGTTCAG
GCCCTGATCG ACACCATCCC GGGCGCCGAA GCCGCGATCG AATCCGCAAA TGAATCGCGC
GGCGGGCTCA GCCGGCTGAT GGGCTCGAAT CTGATGGGCG GCGGCGTGAT GGCGATGGGC
GCACGGCTGA TGGGGCTCGG CCTCGGTATG GCCGACATCC AGAAGCTCGC GCACGAGCTG
TTCCACATCG GCCGCGAAAA GATCGGCCCG GATCGGATGA AGACGATCAT CGCCGAGACG
CCGGGCCTTC GCCAATTCAC GTGA
 
Protein sequence
MDELIERLAD KAGLDKAVAG KSVGIILGFL RNEGPQEPVQ ALIDTIPGAE AAIESANESR 
GGLSRLMGSN LMGGGVMAMG ARLMGLGLGM ADIQKLAHEL FHIGREKIGP DRMKTIIAET
PGLRQFT