Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1924 |
Symbol | |
ID | 4022406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2162066 |
End bp | 2162857 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962117 |
Product | hypothetical protein |
Protein accession | YP_569060 |
Protein GI | 91976401 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.139586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.581672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCTTT TGACCCTCAG GCGAAGCGCC CTGGCTTTCA CTTTCGCTTC TCTGCTGTTC TCCCCCGCCG TCGCCGAACC CGCGAAGCCC AAGCCCGATT TCGCGGTCAA GACCAAGGCG ATCGACGCCA GCGTCACGCT CGACGCGACG ATCAAGGCCG ATCCGAAACT CGCCGAGAAT TGCCTCGCCG AAGGCAAGAA ATGGATCGCC GAGAACCGCG CCGAGGCCGA GCAGGAATTC AAGAGCGATC CGGAACTGTT CCGCAACGGC GCGTGGACCT ATGAGCGCAG CTACGCGACC TCGTCTCTGG TCGCGAACCG CTATCTCAGC ATCTTGCGCA CCGACTACAG CTACACCGGC GGCGCACATC CCAACACCGA CACCAACACC ATTCTATGGG ACAAGACCCA GGCCAAACGT ATCAGCATCC GGCCGTTCTT CACCGAGACC GCCGATGGCG GCCCGACGAT GAAGGCGATG GTGGCGGGCG TGCTCGCCTC ATTGAAGGCC GAGAAAAAAG CGCGCGACAT CGACGACAGC GACACCGACT ACGTCAAGAG CATCGAGCCG AGCCTCGTGA AGATCGGCGC AGTGACTCTC ACGCCGTCGA CCGAAGCCGG CAAGAGCGCC GGCCTCACCT TCCACTACCC GCCCTACGCG GTCGGCGCCT ATGCCGAAGG CGGATACACC GCCTTCGTGC CGTGGCAGAC ATTGAAGCCG TATCTGTCTG CGGAAGGCTC CACGATCTTC GCCGGCGAGC GGCCGAAGAG CGACGAGAAC GGCGGGCAGT AG
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Protein sequence | MNLLTLRRSA LAFTFASLLF SPAVAEPAKP KPDFAVKTKA IDASVTLDAT IKADPKLAEN CLAEGKKWIA ENRAEAEQEF KSDPELFRNG AWTYERSYAT SSLVANRYLS ILRTDYSYTG GAHPNTDTNT ILWDKTQAKR ISIRPFFTET ADGGPTMKAM VAGVLASLKA EKKARDIDDS DTDYVKSIEP SLVKIGAVTL TPSTEAGKSA GLTFHYPPYA VGAYAEGGYT AFVPWQTLKP YLSAEGSTIF AGERPKSDEN GGQ
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