Gene RPD_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1901 
Symbol 
ID4022383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2135662 
End bp2136450 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID637962094 
Producthypothetical protein 
Protein accessionYP_569037 
Protein GI91976378 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG CGCGCCAAGA CACGCTTGCG CGCCTGCAAG GCGCCATCGA CCGGCTCGAA 
AGCGGGACGG CCGAGATCGT CCGGCGCGCT CCGCTCGGTC ACGCGGAAGC TGACGCAACG
CTGCAGGGCG GCCTGGCGCT CGGCGCGTTG CACGAGGTGT TCGCAGACGG CGGCCGCCAC
AGCGCGGCGG CGACGGGGTT CGTCGCGGGG CTGGCGCGTC GTCTGGCTGA GCAGCGTTTT
CTGCTGTGGA TCCGGCCGGA TTTTTCCGCG CGCGAAAACG GCGATCTGGC GATGGAAGGC
TTCGCCGAAC TCGGGCTTGA TCCGCGGCGC ATCGTGCTGG TGCGCGCGCC CGATGCCGAC
CGCGCGCTAC GCGCCGCCGC CGACGCGCTC GCCTGCAACG GGCTCGGCGC GGTGGTCACC
GAGCTATGGG GCGAGACCCG CGCCTTCGAT CTCGTCGCGT CGCGCAAGCT GACGCTGGCG
TCGATGCAGT CCGGCGTCAC CGCGCTGATG CTGCGGATCT CCGCGATGCC GCAGGCCTCG
ACCGCCGAGA CGCGCTGGGT GGTGCGCGCG GCGCATTCGC CGCCGGTGGA AGGGTGGGGC
GCGCCGGTGC TCGAAACTTC GCTCATCCGC AATCGTCACG GCCCAACCGG CCGCTGGATC
ATGGAATGGA ATTGTGATGC GTGCCGCTTC CGTGAACCGC AGACGCATCC TCGGCCTATG
GCTGCCGCGG TTGTCGACCG ATCGTATCGA ACGGAGGTCG CCGCCCCCGA GCGCCGGCTC
GCCGGCTGA
 
Protein sequence
MNGARQDTLA RLQGAIDRLE SGTAEIVRRA PLGHAEADAT LQGGLALGAL HEVFADGGRH 
SAAATGFVAG LARRLAEQRF LLWIRPDFSA RENGDLAMEG FAELGLDPRR IVLVRAPDAD
RALRAAADAL ACNGLGAVVT ELWGETRAFD LVASRKLTLA SMQSGVTALM LRISAMPQAS
TAETRWVVRA AHSPPVEGWG APVLETSLIR NRHGPTGRWI MEWNCDACRF REPQTHPRPM
AAAVVDRSYR TEVAAPERRL AG