Gene RPD_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1886 
Symbol 
ID4022368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2115856 
End bp2116662 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637962079 
Productenoyl-CoA hydratase 
Protein accessionYP_569022 
Protein GI91976363 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0955697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.537222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACAG GAAACGCCTC GGCCGCGACC ATCGCGGATC CCTCGACGCT GGTCGTCGAA 
ACCGTCGGCC CGGTGCTGAC CATCGGCCTC AATCGCCCCA AGAAACGCAA CGCGCTCAAT
GACGGCCTGA TGGCCGCGCT GAAGGACTGT TTCACCGAGC TTCCCGATGA GATTCGCGCC
GTGGTGATCC ACGGCGTCGG CGATCACTTC TCCGCCGGGC TTGATCTCTC CGAGCTGCGC
GAGCGCGACG CCACCGAAGG GCTGGTGCAT TCGCAGACCT GGCACCGGGT GTTCGACCGC
ATCCAGTATT GTCGCGTTCC AGTGATCGCG GCGTTGAAGG GCGCGGTGAT CGGCGGCGGG
CTCGAACTCG CCTGCGCCGC GCATATCCGC GTTGCCGAGC CGGCCGCCTA CTACGCGCTG
CCCGAAGGCA GCCGCGGCAT CTTCGTCGGC GGTGGCGGCT CGGTGCGGCT GCCGCGGCTG
ATTGGCGTCG CGCGCATGGC GGACATGATG CTGACCGGGC GGGTGTATTC CGCAGAGGAA
GGCGTCGCCC ACGGCTTTTC GCAATATCTC ACCGAAAGCG GTTCGGCCTA CGACAAAGCG
CTCGAGATCG GCAACCGGGT CGCCCAGAAT GCGCCGCTGA CCAATTTCGC GGTGCTGCAG
GCGTTGCCGA TGATCGCCGA GGCCAATCCA CAGACCGGGC TGCTGATGGA GTCGTTGATG
GCGACGGTGG CGCAGAGCGA CCAGGAAGCC AAGAACCGGA TTCGTGCATT TCTCGATCAC
AAGACCGCAA AGGTCAAACC GACTTGA
 
Protein sequence
MLTGNASAAT IADPSTLVVE TVGPVLTIGL NRPKKRNALN DGLMAALKDC FTELPDEIRA 
VVIHGVGDHF SAGLDLSELR ERDATEGLVH SQTWHRVFDR IQYCRVPVIA ALKGAVIGGG
LELACAAHIR VAEPAAYYAL PEGSRGIFVG GGGSVRLPRL IGVARMADMM LTGRVYSAEE
GVAHGFSQYL TESGSAYDKA LEIGNRVAQN APLTNFAVLQ ALPMIAEANP QTGLLMESLM
ATVAQSDQEA KNRIRAFLDH KTAKVKPT