| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1850 |
|---|
| Symbol | |
|---|
| ID | 4022332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2070432 |
|---|
| End bp | 2071166 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637962044 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_568987 |
|---|
| Protein GI | 91976328 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.716563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGC CCTTGCTCGA GACCCGCGGC GTCTGGCAGC GCTTCGGCGG CCTGATCGCC
AACAGCGACG TGTCGATTTC GGTCGGCCGC GGCGAGATCG TCGGGTTGAT CGGTCCGAAC
GGCGCCGGCA AGTCGACATT GTTCAATCTG ATCGCCGGTG TGCTGCCGCC GACCCAGGGC
TCGATCATCT TCGACGGCGA GGATGTCACC AGGCTGCCGG CGACTGCGCG CTGCGCCCGC
GGCATCGGAC GTACCTTCCA GGTGGTGAAG AGCTTCGAGT CGATGACGGT GATCGACAAC
GTCATCGTCG GCGCGCTGAT CCGCACCACG GTGATGCGCG AGGCCCGCCG CAAGGCGCAC
GAGGTGCTGC AGTTCTGTGG CCTCGATGCC CGCGCCGATG TGCTGGCGAG CCAGCTTATC
CCGTCGGAGA AGCGCCGGCT CGAAGTGGCC CGCGCGCTCG CCACCGAGCC CAAATTGTTG
CTGCTCGACG AGGTGCTGAC CGGGCTGACG CCGACCGAGG CGCAGACCGG CGTCGAACTG
GTTCGCCGCG TTCGCGATAC CGGCGTCACC GTTCTGATGG TCGAACATGT CATGGAGATC
GTGATGCCGC TGGTCGATCG CGCCATCGTG CTGGATCTCG GCAAGGTGCT GGTCGAAGGC
AAGCCGGCCG ACGTCGTGCG CGATCCGAAA GTCATCACTG CCTATCTTGG GGATCGTCAT
GCTGTCGGTG CGTGA
|
|---|
| Protein sequence | MTAPLLETRG VWQRFGGLIA NSDVSISVGR GEIVGLIGPN GAGKSTLFNL IAGVLPPTQG
SIIFDGEDVT RLPATARCAR GIGRTFQVVK SFESMTVIDN VIVGALIRTT VMREARRKAH
EVLQFCGLDA RADVLASQLI PSEKRRLEVA RALATEPKLL LLDEVLTGLT PTEAQTGVEL
VRRVRDTGVT VLMVEHVMEI VMPLVDRAIV LDLGKVLVEG KPADVVRDPK VITAYLGDRH
AVGA
|
|---|
| |