Gene RPD_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1821 
Symbol 
ID4022303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2040933 
End bp2041271 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID637962015 
Producthypothetical protein 
Protein accessionYP_568958 
Protein GI91976299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.338762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA AGGACAACGA CCCCGCCGCG GCGTGGCAGG CCATGCTCGG CGAGATGAGC 
AGAGGCTTCA CCTCACTCGC CAATCAGGCG ATGGCCTCGC CGGAAGTCGC CAAGGTGGTC
GGTCAGGTCG GCGGCGCCAC CGCGGAGGCG CAGAAGCAGT TCGGCGAGAT GATGGAGAAA
TATCTCGCCA GCCTCAACGT CCCGACGCGC GCGCAGATGG ACGAATTCGC CGCCCGGCTG
TCGGCGATCG AAGCGCGGCT CGATCAGCTC ACCGCGGCGA TCGGCCAGGG TCGCGAGGCA
GCTGGCGACG ATCCGTCACC GAAGCCACGA TCCAAATAG
 
Protein sequence
MADKDNDPAA AWQAMLGEMS RGFTSLANQA MASPEVAKVV GQVGGATAEA QKQFGEMMEK 
YLASLNVPTR AQMDEFAARL SAIEARLDQL TAAIGQGREA AGDDPSPKPR SK