Gene RPD_1804 details

Gene Information

• Locus tag: RPD_1804
• ID: 4022286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: -
• Start bp: 2018072
• End bp: 2018818
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637961998
• Product: hypothetical protein
• Protein accession: YP_568941
• Protein GI: 91976282

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.80641
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCATTT TCACAGGTCC TCCATCGAGC GCGATCCGGA ACAAACCGAT CTCCGAACAA 
CTCAAACGCG TGCTCGCCTC TGCGGCGCAA TCTGCGGGGA TCGACACCAT CATCATCACC 
TCCGGCGGAC AGGACGTGCT CGGCGATGGT CCGCGCCGCA CCGGCTCGAC GCGCCACGAC 
CGCGGGCGAG CCGCCGATCT GCAACTGGTG GTTCGGGGAA CGACGCTCAG CTTCACCAAC 
CAATCTGCGC CGGCAGCGAT GCTGGCTTTC ATCGAGGCCG CCGCCGCCGC GGGGGCCACC 
GGCATCGGCG CGGGCGTCGA CTACATGGGT CCGCGCACGA TTCACGTCGG CTTCGGAAAA 
TCGATCGACG ACCATGAGAC GCTGACATGG GGGGCCAACG GCAGTTCGAG AAATGCGCCG 
CAATGGCTGC GCGACGCCGC CGAAGCCGGC TGGGGAGCAC CGACGGCGCT TGCCGAGTCC 
GACGTCGTCG CCTCCGACCT TGCCGGTGCG GAGACGCCCG GCCGCTACGC GGTCATCGCG 
CGAACCGGCC TGAAGCTGCG CGGTGGTCCG GGGCCCGATT TCGGCTCCGA GAAAACCCTT 
CCGTTGGGCA CCGAATTGAC AGTGACCCAA TTCGGCGGGG CATGGGCGTG CGTCGACGTC 
GAAGGCGACG GCGTGCTCGA CGGCTACGTC TTCGCGTCGT TTCTCGCGCC CGTCGTTTCG 
GACCACGCCG AGGGCGGCGT CGCTTAG 

 

Protein sequence

MTIFTGPPSS AIRNKPISEQ LKRVLASAAQ SAGIDTIIIT SGGQDVLGDG PRRTGSTRHD 
RGRAADLQLV VRGTTLSFTN QSAPAAMLAF IEAAAAAGAT GIGAGVDYMG PRTIHVGFGK 
SIDDHETLTW GANGSSRNAP QWLRDAAEAG WGAPTALAES DVVASDLAGA ETPGRYAVIA 
RTGLKLRGGP GPDFGSEKTL PLGTELTVTQ FGGAWACVDV EGDGVLDGYV FASFLAPVVS 
DHAEGGVA