Gene RPD_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1804 
Symbol 
ID4022286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2018072 
End bp2018818 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID637961998 
Producthypothetical protein 
Protein accessionYP_568941 
Protein GI91976282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.80641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT TCACAGGTCC TCCATCGAGC GCGATCCGGA ACAAACCGAT CTCCGAACAA 
CTCAAACGCG TGCTCGCCTC TGCGGCGCAA TCTGCGGGGA TCGACACCAT CATCATCACC
TCCGGCGGAC AGGACGTGCT CGGCGATGGT CCGCGCCGCA CCGGCTCGAC GCGCCACGAC
CGCGGGCGAG CCGCCGATCT GCAACTGGTG GTTCGGGGAA CGACGCTCAG CTTCACCAAC
CAATCTGCGC CGGCAGCGAT GCTGGCTTTC ATCGAGGCCG CCGCCGCCGC GGGGGCCACC
GGCATCGGCG CGGGCGTCGA CTACATGGGT CCGCGCACGA TTCACGTCGG CTTCGGAAAA
TCGATCGACG ACCATGAGAC GCTGACATGG GGGGCCAACG GCAGTTCGAG AAATGCGCCG
CAATGGCTGC GCGACGCCGC CGAAGCCGGC TGGGGAGCAC CGACGGCGCT TGCCGAGTCC
GACGTCGTCG CCTCCGACCT TGCCGGTGCG GAGACGCCCG GCCGCTACGC GGTCATCGCG
CGAACCGGCC TGAAGCTGCG CGGTGGTCCG GGGCCCGATT TCGGCTCCGA GAAAACCCTT
CCGTTGGGCA CCGAATTGAC AGTGACCCAA TTCGGCGGGG CATGGGCGTG CGTCGACGTC
GAAGGCGACG GCGTGCTCGA CGGCTACGTC TTCGCGTCGT TTCTCGCGCC CGTCGTTTCG
GACCACGCCG AGGGCGGCGT CGCTTAG
 
Protein sequence
MTIFTGPPSS AIRNKPISEQ LKRVLASAAQ SAGIDTIIIT SGGQDVLGDG PRRTGSTRHD 
RGRAADLQLV VRGTTLSFTN QSAPAAMLAF IEAAAAAGAT GIGAGVDYMG PRTIHVGFGK
SIDDHETLTW GANGSSRNAP QWLRDAAEAG WGAPTALAES DVVASDLAGA ETPGRYAVIA
RTGLKLRGGP GPDFGSEKTL PLGTELTVTQ FGGAWACVDV EGDGVLDGYV FASFLAPVVS
DHAEGGVA