Gene RPD_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1803 
Symbol 
ID4022285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2017019 
End bp2018008 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID637961997 
Producthypothetical protein 
Protein accessionYP_568940 
Protein GI91976281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.23913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGA CCGACGACAT GCGATGGTTC AAGCAGCAGT TCCGCAACCA GATCGAAGCG 
GCTTTGCCCG GTACGCCGCT CGACGTCGAT ATGATCACCG CGATCGCCTG TCAGGAGACC
GGCTACATCT GGTCGGCGCT CCGCAAGAAA TCACTGCCGA TCCCGCGCAT CCTGGCGCTG
TGCGTCGGCG ATACGATCGA CTACCAGGGC CCGGGGAGAG GCCGGCAGGC GTTCCCCCGC
TCGAAGGATT CGCTGATTGC CGAGGCGAAC GGCCGCCGGA TGTTCGATAT CGCCCGCGGC
GCGCTCGAAG ACATGGCGGC CTATATTCCC GGCTATCGGG GCGCCGTCGC CAATCCCGAC
AAATTCTGTC ACGGCTTCGG CGTTTTCCAG CGTGACCTGC AGTTTTTCAG GAACGACCCG
AACTACTTCC TCGACCGGCG CTACGAAGAC TTCGGCGACA CGCTGGCACA ATGCCTCGGC
GAACTGCGCC GCGGCTTGAA GAAGCTCGGC TTCGAATCCC GCAGTAGCCT CAGCGATCTC
GAATTCGCAT CCGTCGCCAT CGCTTACAAC ACCGGCGGCT ACAATCCTGC GCGGGGATTG
AAGCAAGGCC ATTTCGACGG TCAGAAATAT TACGGAGAGC ATATTTTCGA CTACCTGACC
ACGTCGCGCG GCGTCCATGT CGAAGGTGTC GACGCGGCGG GCGCTGCTGC GACCGGGGCC
GGCGCCGCGG CGCTGGTTCC CGGCCGTTAC GCGGTGATCG CCCGCGGCGG CCTGAAATTG
CGCGGCGGGC CCGGCGTCGG CTTCAATTCG GAGAGAACGC TGGCGTTGGG CGCCGAACTC
ACCGTCGTCG CGACCGGCGC GACGGACCCG GCCTGGGCCC AGGTCGATAT CGAGGGCGAC
GGGGTGCTCG ACGGCTACGT CTTCGCCAGC TTTCTCGCGC CGCTCGAACA ACATGCGCTG
CTGAACGAGC AGGCCCCCGA GCCCGCGTGA
 
Protein sequence
MPTTDDMRWF KQQFRNQIEA ALPGTPLDVD MITAIACQET GYIWSALRKK SLPIPRILAL 
CVGDTIDYQG PGRGRQAFPR SKDSLIAEAN GRRMFDIARG ALEDMAAYIP GYRGAVANPD
KFCHGFGVFQ RDLQFFRNDP NYFLDRRYED FGDTLAQCLG ELRRGLKKLG FESRSSLSDL
EFASVAIAYN TGGYNPARGL KQGHFDGQKY YGEHIFDYLT TSRGVHVEGV DAAGAAATGA
GAAALVPGRY AVIARGGLKL RGGPGVGFNS ERTLALGAEL TVVATGATDP AWAQVDIEGD
GVLDGYVFAS FLAPLEQHAL LNEQAPEPA