Gene RPD_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1786 
Symbol 
ID4022268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2001132 
End bp2001455 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content69% 
IMG OID637961980 
Producthypothetical protein 
Protein accessionYP_568923 
Protein GI91976264 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0365077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.220778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GCGACGAAGA CATTCTCAAA GCGGCGGAAG ACTGGAAGAA CGCCGGCCAC 
GGCGTCGCGC TCGCCACCGT GGTCGAGACC TGGGGCTCGG CGCCCCGCCC CGCGGGCTCC
AGCCTGGTGA TCAACAATGA CGGCGGCTTT CTCGGCTCGG TGTCGGGCGG CTGCGTCGAG
GGCGCGGTGG TGACCGAGGC GCTCGACGTG ATCGAGAGCG GCCAGCCGAA GCTGTTGGAA
TTCGGCGTCG CCGACGAGAC CGCGTGGAAA GTGGGGCTGT CCTGCGGCGG CACGATCCGG
GTGTTCGTCG AGAAGGTCGG CTAG
 
Protein sequence
MLDRDEDILK AAEDWKNAGH GVALATVVET WGSAPRPAGS SLVINNDGGF LGSVSGGCVE 
GAVVTEALDV IESGQPKLLE FGVADETAWK VGLSCGGTIR VFVEKVG