Gene RPD_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1709 
Symbol 
ID4022189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1923877 
End bp1924560 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID637961903 
Producthypothetical protein 
Protein accessionYP_568846 
Protein GI91976187 
COG category[S] Function unknown 
COG ID[COG4923] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG TCGGCCTCGA TGGCTATCGA CACGGTTGGG TCGCCGTCAC GCTCGACGGC 
GACCGCCATG CAATCGATTT CATCCCGGAC ATTTCCTGGC TCGCGACGCA GCGCTTCACC
CGCGCCGCCA TCGATATTCC GATCGGCCTC CGCGACGACG GCACGCGCGC GTGCGATCTC
GAGGCGCGGG CGTTGTTGCG GCCGCATAGC AGCCGCGTGT TCACCGGCGC ACGGCGCTGG
TTGTGGACCG AATTTCGCTA TCCCGATCAG TTCGCCCAAG CCAACGCTGC GGCGGTCGCC
CGCGGCCAGC CGCGCGTATC GCTGCAGCTC TGGCATCTCG GTCCGAAGAT CATGCAGGTC
GACAGCTTCG TGCGCGCCCA CCATGCGCTC GACATCCGCG AGACGCATCC GGAACTGGTG
TTCCGGCGAT TGAACGATGA TCAGCCGTTG CCGCCCAAGC GGACAGCGGA GGGCCTGCGG
CTTCGCCGCG ATCTGCTGAG CGGACAGGGG ATCGATCAGA TCGATCAGTG GGTGGACCGA
GCGCGGATCG GCCGCGGCGC CAAGGCGGAC GATGTGCTCG ACGCCTGCGC CTGCGCGCTG
GCGGCGCGCG ATAGCGATGC CTGCGTCCCC AGCGCAGAGG CGCCGCTGGA CGACCATGGT
CTGCCAATGC GGATCTGGTA CTGA
 
Protein sequence
MIAVGLDGYR HGWVAVTLDG DRHAIDFIPD ISWLATQRFT RAAIDIPIGL RDDGTRACDL 
EARALLRPHS SRVFTGARRW LWTEFRYPDQ FAQANAAAVA RGQPRVSLQL WHLGPKIMQV
DSFVRAHHAL DIRETHPELV FRRLNDDQPL PPKRTAEGLR LRRDLLSGQG IDQIDQWVDR
ARIGRGAKAD DVLDACACAL AARDSDACVP SAEAPLDDHG LPMRIWY