| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1697 |
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| Symbol | fliR |
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| ID | 4022177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1911668 |
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| End bp | 1912435 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961891 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_568834 |
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| Protein GI | 91976175 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.960297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.708349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCG ACATTTCGTT CCTGCCCGCG CTCGGCGCCG CCTTCATGCT GGTGTTCGCC
CGCATCGGCG CGATGGTGAT GCTGTTTCCG ACGCTCGGCG AGAGCAACAT CCCGGTGCGC
ATCAAGCTGT CGATCGCGCT GGGGCTGACG CTGATCATCC TGCCGCTGCA CCGCAGCGCC
TATCAGGTCG ATATGTCGTC GCTGACGCCG CTGCTGGTAA TGATGATTCA GGAGATCATC
ATCGGCATCG TGCTCGGCGC CACCGCGCGG GTGACGCTGT CGGCGCTGCA GGTCGCAGGC
TCGGTGATCG CGCAGCAACT CGGGCTCGGC TTCGTCACCG CGGTCGATCC GACCCAGGGC
CAGCAGGGCC TGCTGATCGG CAACTTCCTC ACCATCCTCG GTGTGACGAT GCTGTTCGCC
ACCGACTCGC ATCATCTGGT GATCCAGGCG CTGAGCGACA GCTACAAGAT CTTCGCGCCG
GGCGAGCTGC TGAGCAGCGG CGACGTCGCG GCGCTCGCGA CGAAGGCGTT CGCCGCATCG
TTCAAGATCG GGATGCAGCT CGCCGCGCCG TTCCTGGTGT TCGGCCTGGT GTTCAACATC
GGCCTCGGCA TCCTGGCGCG GCTGATGCCG CAGATGCAGG TGTATTTCGT CGGCGTGCCC
CTTTCCATCG CGATCGGCTT CATCATCCTC GCTGCCGTGC TCACGACGAT GATGAGCACA
TTCCTCAATT ATTTCGGCGG CGTCATGCAA CAGCTGACGC CACGCTGA
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| Protein sequence | MRIDISFLPA LGAAFMLVFA RIGAMVMLFP TLGESNIPVR IKLSIALGLT LIILPLHRSA
YQVDMSSLTP LLVMMIQEII IGIVLGATAR VTLSALQVAG SVIAQQLGLG FVTAVDPTQG
QQGLLIGNFL TILGVTMLFA TDSHHLVIQA LSDSYKIFAP GELLSSGDVA ALATKAFAAS
FKIGMQLAAP FLVFGLVFNI GLGILARLMP QMQVYFVGVP LSIAIGFIIL AAVLTTMMST
FLNYFGGVMQ QLTPR
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