Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1688 |
Symbol | |
ID | 4022168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1902486 |
End bp | 1903253 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961882 |
Product | hypothetical protein |
Protein accession | YP_568825 |
Protein GI | 91976166 |
COG category | [S] Function unknown |
COG ID | [COG3334] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0687483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.086166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAT TTCGCGACGT CCGCATCCTT CCGGTCGTGC TGGTCGCGAT CCTCGGCCTT GTCGTGCTCA AGGTCGCCGG GTTGATGCTC GATGGCGGCT ATATGTTCGA TTACGATCCC AAGGCCACCA AGCCGTCTTG GGCGCAGGCC AACCTGAATT TTCCCGGCGG CAACGCCAAG ACCGGAGATT CCGACATCAC CGGCTCGGTG CCGGCGGCGC CGAAGAAGGA AGAGCCGAAG CCGGTGGTCG CGCCGCCGGA GGAGGCCAAG CCGGCCGAGA CCGAGCCGCC GCAGGCGATA TCTCCCGCCG AGCGCGCCAT TCTGGAGCGG CTGCAGGCCC GGCGGCAGGA ACTGGATGCG CGCGCGCGCG AGGTCGAAAT CCGCGAGAGC CTGCTGAAGG CGGCGGAGAA GCGGATCGAG TCGCGAGTCG AGCAGATAAA GGCCAGCGAG GGCGAAATCG GAAAGGCGAC CGAGCAGAAG ACCGAAGCCG ACGCCGCGCG CTTCAAGGGC ATCATCACGA TGTACGAATC GATGAAGCCG AAGGACGCGG CGAAGATCTT CGATCGGCTC GAGATGCCGG TTCTGATCGA AATCGCTTCG CAGATCGCGC CGCGCAAGAT GTCCGACATT CTCGGTCTGA TGACGCCCGA AGCCGCCGAG AAGCTGACGG TCGAGATGGC GCGCCGGGCC AGCGGCAGGT CGGCCGCCAC GGCGTCGGCC GCTGCGCTAC CGAAGATCGA GGGCCGGCCG CTTCCGCCGC GGCAGTAA
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Protein sequence | MNAFRDVRIL PVVLVAILGL VVLKVAGLML DGGYMFDYDP KATKPSWAQA NLNFPGGNAK TGDSDITGSV PAAPKKEEPK PVVAPPEEAK PAETEPPQAI SPAERAILER LQARRQELDA RAREVEIRES LLKAAEKRIE SRVEQIKASE GEIGKATEQK TEADAARFKG IITMYESMKP KDAAKIFDRL EMPVLIEIAS QIAPRKMSDI LGLMTPEAAE KLTVEMARRA SGRSAATASA AALPKIEGRP LPPRQ
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