| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1668 |
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| Symbol | |
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| ID | 4022148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1882247 |
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| End bp | 1884118 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961863 |
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| Product | flagellar hook-associated protein |
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| Protein accession | YP_568806 |
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| Protein GI | 91976147 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.121705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTCG GAGACGCACT TTCGATCGCA ATGGCCGGCC TGCGCGCCAA CCAGGCCTCG
ATGTCGCTGG TGTCGTCCAA CGTCGCCAAC GCCGAGACGC CGGGTTACGT CCGCAAGACC
GTCGATCAGA TCACCACCAC TGCCGGCCCG TCTGGCAGCG GTGTTTCGAT CATCGGCGTC
AACCGCGAAC TCGACGCCTA TCTGCAGTCG CAGCTTCGCA CCGAAACCTC GGGCGCCTCC
TACGCCTTGC TGCGCTCCGA CTTTCTGAAG CAATTGCAGG GCCTGTATGG CAACCCGAAC
TCGACCGGCA CCCTTGAGAA CGCGTTCAAC AGTTTGACCG CCGCGGTACA GGCGCTCGGC
ACCAGCCCCG ACAGCACCTC GGCGCGAATC GGCGTGCTCA ACGCCGCGCG GGTGGTGGCG
GGCGGGCTCA ACGCGACATC CAACGGAATC CAGTCGCTCC GCTCCGGCGC CGAGACCGGA
CTGGCCGACA GCGTCAACAC GGCGAACAAT CTGCTGCAGC GGATTGCATC GATCAACAAC
AACATCCGCA CCAATCCCGC GGGGGGCACC TCGACCGACG TGGCGACCGC GTCGCTGCTC
GACCAGCGTG ACGCGGCGAT CAGCCAGCTC TCGCAACTGA TGGACATCCG CGTCGTCACC
GACGGCTCCA ATCGGGCCAC GGTGTTCACC GGCTCCGGAA TGCAGCTCGT CGGTATGCAG
GCGGCCAAGC TGTCCTTCGA TGCGCAGGGC ACCGTGACGC CGAGCACGAC CTGGAGCTCG
AACTCGGCGA CGAGCCAGCT CGGTTCGGTC AAGATCACCT ATGCGGATGG TGGCACGATC
GATCTCACCA GTTCGCTGAA ATCGGGCACG ATTGCGGCCT ATATCGAGCT GCGCGACAAG
ACTCTGGTGC AGGCCCAGAC CCAGCTCGAT CAATTCGCGG CGTCGATGGC GAGCGCTTTG
TCCGACAAGA CCACCGCCGG AACCCCGGCG ACGTCGGGCG CGCAGGCCGG TTTCGCGCTC
GATCTGACCA ACATGAAGCC CGGCAACACC TTCAACATCA GCTACACCGA CACGACGACA
GGCGCGCAGC GCACGGTGTC GGTGATGCGG GTCGACGATC CCTCGGTGCT GCCGCTGCCG
CAGACCGCGA CGCTCGATCC CAACGACTAT GCGGTCGGCA TCGACTTCTC GGGCGCGTCG
GGATCGATCA CCGCACAGCT CAACGCCGCG CTGAACGCCA AGAACCTGGA GTTCACCGGC
ACGTCGCCGA ACATCACCGT GCTCAACAAT CCAGGCTTCT CGACGGTGAC TGCGGCCTCG
GTGACCACGA CCGAAACCTC GCTGACCGGC GGCAGCGCCG AGGTGCCGTT GTTCACCGAC
GGCTCGTCGG CCTACACCGG CGTGCTCAGC GGCACCGGAG CGCAGATGAC CGGCTTCGCG
CAGCGCATCG CGGTCAATAC CGGGCTGATC ATCGATCCGT CGCGGCTGGT GGTGTATTCG
ACCACGCCGC CCACCGCGGC CGGCGACACC ACGCGGCCGG ACTTCCTCAC CAAACAGCTC
ACCACCAGCA AGTATCTGTA CTCGGCGGCG ACCGGGATCG GTTCGACCAG TGCGCCGTAT
AACGGCACGC TGTCGAGCTA CCTGCAGCAG TTCGTCGGTC AGCAAGGCTC CGACGCATTG
GCGGCATCGC AACTCGCCGA GGGGCAGAGC GTCGTGCTGA ACACGCTGCA GCAAAAGTAT
TCGACCAGCT CCGGCGTCAA CATGGACGAA GAGATGGCGC ATCTGCTGTC GCTTCAAAAC
GCGTATTCGG CGAATGCACG GGTGATGTCG ACGGTGAACC AGATGTATCA GGCCCTGATG
CAGGTGATGT GA
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| Protein sequence | MGLGDALSIA MAGLRANQAS MSLVSSNVAN AETPGYVRKT VDQITTTAGP SGSGVSIIGV
NRELDAYLQS QLRTETSGAS YALLRSDFLK QLQGLYGNPN STGTLENAFN SLTAAVQALG
TSPDSTSARI GVLNAARVVA GGLNATSNGI QSLRSGAETG LADSVNTANN LLQRIASINN
NIRTNPAGGT STDVATASLL DQRDAAISQL SQLMDIRVVT DGSNRATVFT GSGMQLVGMQ
AAKLSFDAQG TVTPSTTWSS NSATSQLGSV KITYADGGTI DLTSSLKSGT IAAYIELRDK
TLVQAQTQLD QFAASMASAL SDKTTAGTPA TSGAQAGFAL DLTNMKPGNT FNISYTDTTT
GAQRTVSVMR VDDPSVLPLP QTATLDPNDY AVGIDFSGAS GSITAQLNAA LNAKNLEFTG
TSPNITVLNN PGFSTVTAAS VTTTETSLTG GSAEVPLFTD GSSAYTGVLS GTGAQMTGFA
QRIAVNTGLI IDPSRLVVYS TTPPTAAGDT TRPDFLTKQL TTSKYLYSAA TGIGSTSAPY
NGTLSSYLQQ FVGQQGSDAL AASQLAEGQS VVLNTLQQKY STSSGVNMDE EMAHLLSLQN
AYSANARVMS TVNQMYQALM QVM
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