Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1635 |
Symbol | |
ID | 4022115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1833525 |
End bp | 1834520 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637961830 |
Product | mandelate racemase/muconate lactonizing enzyme |
Protein accession | YP_568773 |
Protein GI | 91976114 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA CTCAACTGCC CGAATTGACC GCCCGTATCG AGCGCTGGCC GATCGCGGGC GCCTTCACGA TCAGCCGCGG CGCCAAGACC GAAGCGGTCG TGGTGATTGC CGAGATCAGC CGCAATGGAC AAGCCGGCCG GGGTGAATGC GTTCCCTATG CCCGCTATGG CGAGACGCCT GATGCGACCC TGGTCGCGAT CGAGGCGATG CGCGAGCCAT TGCGTCGCGG GCTCGACCGC GCCGGCCTGC ACTCCGCGAT ACCGCCGGGC GCAGCGCGCA ACGCGCTCGA TTGCGCGCTG CTCGACCTCG AGGCCAAGGC CAGCGGCCGG CGCGCCTGGG ACGTGCTCGG CAGCGCCGCA CCGCTCGCCG CGATTACAGC CTTGACCATC TCGCTCGGCA CGCCGGACGC GATGGCCGAA GCGACCGAGA GGGCCGCCGC CCGCCCGCTC CTGAAGATCA AGCTCGGTGG CGACGGCGAC GACGCCCGGA TCGCCGCGGT CCGCCGCGCG GCGCCGCAGG CCGAACTGAT CGTCGACGCC AACGAGGCGT GGACGCCCGA CAACCTCGCT CGCAACCTCG CGGCCTGCGC GGATGCCGGT GTGACGCTGG TGGAGCAGCC GCTGCCGGCC GGGCGCGATG AGGCGCTGGC GCAGATCAGG CGGCCGATCG CGGTCTGCGC CGACGAAAGT GTCCACGCCC GCGGTTCGCT CGAAGGCCTG CGCGGACGCT ATGACGCGAT CAACATCAAG CTCGACAAGA CCGGAGGCCT GACCGAGGCG ATCGCGATGG CGAAAGCGGC GCAGGCGCTC GGCCTCGACA TCATGGTCGG CTGCATGGTC GCAACCTCGC TGTCGATGGC GCCGGCGATG CTGCTGACGC CTTATGCCCG TTTCGTCGAT CTCGACGGCC CCTTGCTGCT CGCCAGAGAC CGCGACAACG GCCTGCGCTA CGACGGCAGC ACCGTCTATC CGCCTGAGCC CGGACTGTGG GGCTGA
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Protein sequence | MTSTQLPELT ARIERWPIAG AFTISRGAKT EAVVVIAEIS RNGQAGRGEC VPYARYGETP DATLVAIEAM REPLRRGLDR AGLHSAIPPG AARNALDCAL LDLEAKASGR RAWDVLGSAA PLAAITALTI SLGTPDAMAE ATERAAARPL LKIKLGGDGD DARIAAVRRA APQAELIVDA NEAWTPDNLA RNLAACADAG VTLVEQPLPA GRDEALAQIR RPIAVCADES VHARGSLEGL RGRYDAINIK LDKTGGLTEA IAMAKAAQAL GLDIMVGCMV ATSLSMAPAM LLTPYARFVD LDGPLLLARD RDNGLRYDGS TVYPPEPGLW G
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