Gene RPD_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1591 
Symbol 
ID4022071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1784916 
End bp1786034 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content63% 
IMG OID637961786 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_568729 
Protein GI91976070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.442624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAA CCAAAGCCCC GTTCCGAGCC GACGAGGTCG GCAGCCTGCT GCGTCCGCAG 
AGTATCAAGG ACGCGCGCGC CAGGCTCGAG AAGGGCGAAA TCTCCGCCGC CGATTTGCGC
AGGATCGAGG ACATGGAGAT CGAGAAGATC GTCCACAAGC AGTCGGCGAT CGGACTGAAG
CTCGCCACCG ACGGCGAATT CCGCCGCTCC TGGTGGCATT TCGATTTCCT CAGCCATCTC
ACTGGCTGCG AGCTTTACCA TCCCGACACC GGAATTCAGT TCGCCGGCGT GCAGACCCGA
AACGATTCGA TCCGGGTGAT CGGCAAGCTG GATTTCCCCG ACGACCACCC GATGCTCGAG
CATTTCCGCT TTCTGAAGAG GCATGCCGAC ATCGCGCATG TGACGGCGAA GATGACGATC
CCGTCGCCGG CGGTGCTGCA TTTCCGCGGC GGCCGCAAGG CGATTTCCAG CGAGGTCTAT
CCCGATCTCG ACGGCTTCTT CGAGGATCTC GCCAGGACCT ATCGCAAAGC CGTGAAGGCG
TTCTACGACG CCGGCTGCCG CTATCTGCAA TTCGACGACA CGGTGTGGGC CTATCTGTGC
TCGCAGGACG AATTGCAGAA GGCGCGGGAG CGCGGCGACA ATCCGGACAA TCTGCAGCAG
ATCTATTCGC GGGTCATCAA CTACGCGATC GCCGAGCGGC CGTCCGACAT GGTGATTACC
ACCCATGTCT GCCGCGGCAA TTTCCGCTCG ACCTGGATTT CGTCCGGCGG CTACGAGCCG
GTGGCCGAGA CGCTGCTCGC CGGCATCAAT TACGACGGCT ACTTCCTCGA ATACGACTCC
GAACGCGCCG GCGGCTTCGA ACCGCTGCGC TTCCTGCCGA AGGGCAACAA GGTGGTGGTG
GTCGGCGTCA TCACCTCGAA GTTCGGCGAG CTCGAGAAGA AGGACGACAT CAAGCGGCGG
CTCGACGAGG CGGCGAAATT CGCGCCGCTC GCGCAGCTCG CGCTGTCGCC GCAATGCGGC
TTCGCCTCCA CCGAAGAGGG CAACATCCTC AGCGAGCAGG AGCAGTGGGA CAAGCTGCGC
CTCGCCGTCG AAGTGGCGCA GGACGTCTGG GGCAGATAG
 
Protein sequence
MQRTKAPFRA DEVGSLLRPQ SIKDARARLE KGEISAADLR RIEDMEIEKI VHKQSAIGLK 
LATDGEFRRS WWHFDFLSHL TGCELYHPDT GIQFAGVQTR NDSIRVIGKL DFPDDHPMLE
HFRFLKRHAD IAHVTAKMTI PSPAVLHFRG GRKAISSEVY PDLDGFFEDL ARTYRKAVKA
FYDAGCRYLQ FDDTVWAYLC SQDELQKARE RGDNPDNLQQ IYSRVINYAI AERPSDMVIT
THVCRGNFRS TWISSGGYEP VAETLLAGIN YDGYFLEYDS ERAGGFEPLR FLPKGNKVVV
VGVITSKFGE LEKKDDIKRR LDEAAKFAPL AQLALSPQCG FASTEEGNIL SEQEQWDKLR
LAVEVAQDVW GR