Gene RPD_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1590 
Symbol 
ID4022070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1784173 
End bp1784895 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID637961785 
ProductABC transporter related 
Protein accessionYP_568728 
Protein GI91976069 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC TGTTGTCGAT CGAGAAACTG CGCGCCGGCT ACGGCGAGGC CGTGGTGCTG 
CCTGAGCTGT CGCTTGCGCT CGAGGACGGC GAGGCGCTGG CGCTGCTCGG CCGAAACGGC
ACCGGAAAGA CCACGCTGAT CAACTCGATC GTCGGCGTCA CCCGACGATT CTCCGGCCGG
ATCGCGCTCG GCGGCGTCGA CGTCACCACG ATGCGGCCCG ATCAGCGGGC GCGCGCGGGG
ATCGGCTGGG TGCCGCAGGA GCGCAACATC TTCAAGTCGC TCACCGTCGA GGAAAACCTG
ACCGCGGTGG CGCGGCCCGG TCCGTGGACG GTGGCGCGGA TCTACCAGAT GTTTCCGCGG
CTCGAAGAAC GGCGCGGCAA TTTCGGCAAT CAGCTCTCGG GCGGCGAGCA GCAGATGCTG
GCGATCGGTC GGGCGCTGAC GCTCAATCCG AAACTGCTGC TGCTCGACGA GCCGACCGAG
GGGCTGGCTC CGATTATCGT TGACGAATTG CTAACAGCGC TCGGCGCGAT CACCCGGTCG
GGCGGCATCT GCACGATCAT CGTCGAACAG AACGCGCGAA AAATCCTCGG GCTCGCGGAT
CGCGTTGTGA TATTGGAGCG CGGAGCGATC GTGCATGACG CGACCAGCGC GGCGCTGAAG
GACGACCCCG CAACGCTGGA GCGCTATCTC GGCGTTTCGG GCGCCGCCGG CACAAAGAGC
TGA
 
Protein sequence
MSELLSIEKL RAGYGEAVVL PELSLALEDG EALALLGRNG TGKTTLINSI VGVTRRFSGR 
IALGGVDVTT MRPDQRARAG IGWVPQERNI FKSLTVEENL TAVARPGPWT VARIYQMFPR
LEERRGNFGN QLSGGEQQML AIGRALTLNP KLLLLDEPTE GLAPIIVDEL LTALGAITRS
GGICTIIVEQ NARKILGLAD RVVILERGAI VHDATSAALK DDPATLERYL GVSGAAGTKS