| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1581 |
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| Symbol | |
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| ID | 4022061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1775149 |
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| End bp | 1777593 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961776 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_568719 |
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| Protein GI | 91976060 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.861297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCGC TACCCTTGTC GGAATTGCGC GTCGTGGAAA TCGGATCCGG CGACGCGCTG
GCTTATTGTG GGAAGCTGTT CGCCGATTTC GGCGCCGAGG TCATCAAGGT CGAGCCGCCC
GGCGGCGATC CCGATCGACA GATCGCTCCG CTGGTCGATG CCGGAGGGCG AAGCGAAAGC
GCCACCTTCG CGTGGCTCAA CACCAACAAA TACAGCATTA TCGGCGACCT CGATCGACCC
GACGACACCG CACGCATCGA ACGATTACTT GCGGACAGCG ACCTGCTGCT CGACGCGCGT
CACCCGGCAG CGATCGAAGC ATCGCCGCTG TCGCATCGGC GTCTGCGCGA GGTGCAGCCC
GGCCTTGCGA TCACGTCGCT GTCGTGGTTC GGCGAACACG GTCCCTATCG CGATTATCTC
GCGACCGATT CCGTGTGCCG CAGCCTCGCC GGTCTGGTGA AACTGGTCGG CCCAGCGGAA
GGTCCGCCGG TGCTGCCACG CGACGGCCAG ATCGCCGTGA TCGCCGGCCT CACGGCGTTC
ATCCCGACCC TGGCGGGGCT CTATGCCCGC GCCGATCAGG GCGCGCGGCG ATTCGCCGTC
AACGCCTTCG AGGCGATGCT TCAGATCACC GAATTCGATA TCGCACTAGC GCTGGAAGCG
GGCTCCACAC GGCCGCGGAT CGGGCTGAAC CGGTTCGGCC GGGGCTTTCC GGTCGGCAAC
TACGCCACCA AGGACGGCTG GCTCGGCGTC ACGGTGGTGA CTCCGGCGCA ATGGCTCGGC
TTTTGCGCAA TGATCGGCCT GCCCGAACTC GGCCCCGACC CGCGCTACTC CGCGACCGCG
GATCGCTTCA TCCATGCCGA CGAACTCAAC TCGATCATCC GGCCGGTGCT GATGCACAAA
ACCGCGCTGG AATGGTTCGA GCGCGGCATT GAATTGCGGC TGCCGCTGGC GCTGATTCCG
GACATGGCGC AGTTGCTGGC GCAGCCGGTG ATGCGCGAGC GCGGAGCTTT CGCGAAGGTC
GAGATCGGCG CCTCGTCGTT CGACGCGCCC GTGCTGCCGC AGCGCCTGAC GAAATCACCC
GGCAAGCCGA ACGGCCGCGC CCCACGCGCC GGTGAACACA ATGACGCGGA GCTGTCGCCG
CGCCGGCGCA CCGCCGAACG TGCCGTCCGC CCGAACGAAG CTCTGCCGTT GTCGGGCATC
CGCATCGTCG ATCTCACCAT GGGCTGGGCG GGACCATCGG CTGTGCGTCA GCTCGGCGAT
CTCGGCGCCG ATATCATCAA GGTCGAGTCC TGCCAATATC CGGACTGGTT TCGCGGCACC
GATCCACGCG GGCCTTACCA TCCCGAACGG ACCTATGAGA AGACCTACTG GTTCCAGACC
ATGAACCGCA ACAAGCGCGG CATCACGCTG GACCTCACCA CCGACGACGG GCGCGCCGTG
CTGAAGCAAC TGCTCGCGGG CGCCGACGCG GTGATCGACA ACTACGCGGC CGATGTGCTG
CCGCGGCTCG GCCTCGACGT CGCCGCGATG CAGGCGATCA ATCCGCGCCT CGTCGTGGTG
ACGATGCCGG CCTTCGGCAT CACCGGCCGC TGGAGCGCCG CTCGCGCCTA TGGCTCGACG
CTCGAGCAGG CGTCGGGCCT GCCGTCGGTG ACGGGCCGCG ACGGCGATCC GCCGACCATG
CTGCACGCGG CGCTCGGCGA TCCGGTCGGC GGACTGAACG CCGCCGCCGC GCTGATGCTC
GGGCTGATGC ATCAGAAGCG AACCGGCGAC GGTCAGCACA TCGACCTCTC GCAGGTCGAA
TGCATGCTGC CGATGCTGGC GTCATCGATC ATCGAGCAAT CGGCGACGGG ACACACCAGT
CCACGGATCG GCAACCGTCA TCCGCGCTTT GTGCCGAGCG GCTGCTTTCC CTGCGCCGGC
GACGATCAAT GGGTCACGCT GGCCGTGCAG ACCGACGCGC AATGGAAGGC ATTATGCAGG
GTGATGCACC GGCCCGACTT CGCCGCCGAT CCCTCGCTCG CCACCGCGGA CGGTCGTCGT
GCCGACGAGG ATCGCATTGA GATCGCAGTC CGACACTGGA CATCCAGTGT GCGGCCGGAA
CTCGCGATGG TGACGCTCCA GGAGGCCGGC ATCGCCGCAG GGGTCGCTCG GCTGCCGATC
GATCTGGTCG GCGATCCGCA TTTGCTCAAA ACCGGACATT GGCAACCGGT GGTGCGCCGG
TTCATGGGCG CGCATCTGTT GCCGTCGGTG TCCTATCGCG AGGACTTCGC CGACCTGCCC
TACCCGATCG AACGACTCGC GCCCACGCTC GGCCAACACA ATGACGAGGT ACTGCGCGAG
CTTGGACTAA GCGACGCCGA GATCGAAGGC CTGCACGATC GGGGTGTGAT CGGAAATGTA
GCAACCACGA AAAAGAGCGG CGGCGTTAGG CTTGCGGCGG AGTAA
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| Protein sequence | MRALPLSELR VVEIGSGDAL AYCGKLFADF GAEVIKVEPP GGDPDRQIAP LVDAGGRSES
ATFAWLNTNK YSIIGDLDRP DDTARIERLL ADSDLLLDAR HPAAIEASPL SHRRLREVQP
GLAITSLSWF GEHGPYRDYL ATDSVCRSLA GLVKLVGPAE GPPVLPRDGQ IAVIAGLTAF
IPTLAGLYAR ADQGARRFAV NAFEAMLQIT EFDIALALEA GSTRPRIGLN RFGRGFPVGN
YATKDGWLGV TVVTPAQWLG FCAMIGLPEL GPDPRYSATA DRFIHADELN SIIRPVLMHK
TALEWFERGI ELRLPLALIP DMAQLLAQPV MRERGAFAKV EIGASSFDAP VLPQRLTKSP
GKPNGRAPRA GEHNDAELSP RRRTAERAVR PNEALPLSGI RIVDLTMGWA GPSAVRQLGD
LGADIIKVES CQYPDWFRGT DPRGPYHPER TYEKTYWFQT MNRNKRGITL DLTTDDGRAV
LKQLLAGADA VIDNYAADVL PRLGLDVAAM QAINPRLVVV TMPAFGITGR WSAARAYGST
LEQASGLPSV TGRDGDPPTM LHAALGDPVG GLNAAAALML GLMHQKRTGD GQHIDLSQVE
CMLPMLASSI IEQSATGHTS PRIGNRHPRF VPSGCFPCAG DDQWVTLAVQ TDAQWKALCR
VMHRPDFAAD PSLATADGRR ADEDRIEIAV RHWTSSVRPE LAMVTLQEAG IAAGVARLPI
DLVGDPHLLK TGHWQPVVRR FMGAHLLPSV SYREDFADLP YPIERLAPTL GQHNDEVLRE
LGLSDAEIEG LHDRGVIGNV ATTKKSGGVR LAAE
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