| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1569 |
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| Symbol | |
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| ID | 4022049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1760994 |
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| End bp | 1762922 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961764 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_568707 |
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| Protein GI | 91976048 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.325884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATT ACGCCGGCCG CGTCGCGCAA GCCGACACAT TCCCCAAGCT GCTGCGTCTC
AATGCCCGCG AGTTCGGCGG CGAGATCGCC TTGCGGGAAA AGGACCTCGG CCTCTGGCGC
GTGTTCACCT GGGCTGACTA CCAGACCCGG GTCCATGATT TCACGCTGGG CATGCTGGAA
CTGGGGCTGA CCCGCGGCGA CGTCATCGGC ATCATCGGCG ACAACCGGCC CGATTGGGTG
GCGGCGGAGA TCGCGACCCA CGCGATCGGC GCGATGAGCC TCGGGCTGTA CCGCGACGTG
CTCGACGAGG AGGCCGCCTA TCTGCTGACC TACGGCGCGG CAAAGCTGGT GTTCGCCGAG
GACGAAGAGC AGGTCGACAA GCTGCTCGGC CTCGCCGACC GCGTGCCCAA CCTGCAGCAT
ATCGTCTATT CCGATCCGCG CGGCATGCGG AAATACGACG ACCCGCGGCT GATTCCGGCC
GACCGGCTCG CCGCGATGGG GCGCGACCGC GCCGCCCGCG AGCCGGGGCT ATACGACAGG
CTGGTCGACG CGACGCAAGG CGGAGACGTC GCGATCCTGT GCACGACCTC GGGCACGACC
GCGCATCCCA AGCTGGCGAT GCTGGCTGCA GGACGCATTC TGAAGCATTG CGCGACCTAT
CTCAGCTTCG ACCCGAAGGG GCCGGAGGAC GAATACGTCT CGGTGCTGCC GCTGCCTTGG
ATCATGGAGC AGGTCTACGC GCTCGGCAAA GGGCTGTTGT GCCGGATGAA GGTCAACTTC
GTCGAAGAGC CCGACACGAT GATGAACGAC TTCCGCGAGA TCGCGCCGAC CTTCGTGCTG
TTCGCGCCGC GGGTCTGGGA AGGCCTTGCG GCGGATGTCC GCGCGCGGGT GATGGACGCC
TCACCGCTGA AACAGCGGCT GTACGAGACC GGCATGAAAG CGGGGCTCGC CGCATTGGCG
GAGGGCAAAC ATTCCGGCTT CGCCGACGCG GTACTGTTCC GGGCGCTGCG CGACCGGCTC
GGGTTCACGC GGCTGCGCTC GGCGGCGACC GGCGGCGCGG CGCTCGGCCC CGACACTTTC
AAGTTCTTCC GCGCGATGGG CGTGCCGCTG CGCACGCTAT ACGGCCAGAC CGAACTGCTC
GGCGCCTACA CCTTGCATAG GCCGGATGAG GTCGACCCCG ACACCACCGG TGTGCCGATG
GGACCCGAGA TCGAGATCAA GGTCGAGAAT CCCGACGTCC AGGGCATCGG CGAAATCGTG
GTGCGCCACC CCAACATGTA TCTCGGCTAC TACAAGAACG AGGAAGCCTC GGCCGCCGAC
ATGAAGGACG GCTGGATGCA ATCCGGCGAC GCCGGCTATT TCAACGCCAA GGGCCAGCTC
GTCGTCATCG ACCGCATCAA GGATCTCGCC GAAACCTCGC ACGGCGAAAA GTTCTCGCCG
CAATATATCG AGAACAAGCT GAAATTCTCG CCTTACGTCG CCGAAGCCGT GGTGCTCGGC
GCCGGGCGCG AGCGGCTCGC GGCGATGATC TGCATCCGCT ACTCGATCAT TTCGAAATGG
GCCGAGAAGA AGCGGATCGC CTTCACCACC TATTCGGATC TGTCGTCGCG CCCCGAGGTC
TACGAGATGC TGCGCAGCGA GGTCGAGAGC GTCAACGCGA CGCTGCCGGC CGCGCAGCGG
ATCTCCCGCT TCCTGCTGCT GTACAAGGAA CTCGACGCCG ACGACGGCGA ATTGACCCGC
ACCCGGAAGG TCCGCCGCAC GGTGATCAAC GAGAAGTATG CCGACATCAT CGACGGCATC
TACGGCGGCA AGAGCGACAT CCCGGTCGAC ACCGTGATCC AGTTCCAGGA CGGCACCACC
CAGCGCATCC GCACCTCGCT GAAAGTGGTC GACCTCGGCC TCCCCGCCCA TGCGGAGGCG
GCGGAATGA
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| Protein sequence | MIDYAGRVAQ ADTFPKLLRL NAREFGGEIA LREKDLGLWR VFTWADYQTR VHDFTLGMLE
LGLTRGDVIG IIGDNRPDWV AAEIATHAIG AMSLGLYRDV LDEEAAYLLT YGAAKLVFAE
DEEQVDKLLG LADRVPNLQH IVYSDPRGMR KYDDPRLIPA DRLAAMGRDR AAREPGLYDR
LVDATQGGDV AILCTTSGTT AHPKLAMLAA GRILKHCATY LSFDPKGPED EYVSVLPLPW
IMEQVYALGK GLLCRMKVNF VEEPDTMMND FREIAPTFVL FAPRVWEGLA ADVRARVMDA
SPLKQRLYET GMKAGLAALA EGKHSGFADA VLFRALRDRL GFTRLRSAAT GGAALGPDTF
KFFRAMGVPL RTLYGQTELL GAYTLHRPDE VDPDTTGVPM GPEIEIKVEN PDVQGIGEIV
VRHPNMYLGY YKNEEASAAD MKDGWMQSGD AGYFNAKGQL VVIDRIKDLA ETSHGEKFSP
QYIENKLKFS PYVAEAVVLG AGRERLAAMI CIRYSIISKW AEKKRIAFTT YSDLSSRPEV
YEMLRSEVES VNATLPAAQR ISRFLLLYKE LDADDGELTR TRKVRRTVIN EKYADIIDGI
YGGKSDIPVD TVIQFQDGTT QRIRTSLKVV DLGLPAHAEA AE
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