| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1509 |
|---|
| Symbol | |
|---|
| ID | 4021989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1684444 |
|---|
| End bp | 1685331 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961704 |
|---|
| Product | phenylacetyl-CoA:acceptor oxidoreductase |
|---|
| Protein accession | YP_568647 |
|---|
| Protein GI | 91975988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.099001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGC GAGACAAGAT CATCGATCGG ATGATGCCGC GCCAGCAGAC CTATTGGGAC
GCGCGGGCGG CGATCAACTT CATCTGCGTC GGCGCCGGCG GCGGGCTGCT GTTCGTCACC
GCGCTGGCTT CGCCGGCCGG CGACGATCTG CGCCCGCTGC TGGTCCTCGC GCTGGCGCTG
GTCGGCACCG GCATGACCGC GGTCTGGTTC GAGATCGGCC GGCCGCTGCG CGCGTTCAAC
GTCTATCGCA ACGCGGCGAC GTCGTGGATG ACGCGCGAAG CGATCATCGT CCTGTTGCTG
GTCGTGTCCG CCGCCGCCGC GATCGTGTTC GACCTGCGGG CGGCGCTGGC GATCGCCGGC
CTGCTCGGCC TCGCCGTCGC GTTTGCGCAG GGGCGCATCC TGCGCGCGCA GAAGGGCATC
CCAGCCTGGC GATGCTCGAT CTGCGTCAGC ATGATCGTAG TCAGCGGCCT GACCGAGGGT
GCCGGCCTGC TCAGCCTTGC GGCGCTGTAT TGGCCGGCGC TGCTGCCGTT CGGCATTCTG
CTTGCCGGCC TTGCCGGCGT CCGCCTGCTG GTCTGGCGCA ATTACTTCGC CACCTTGCGC
CGGGATGGCG CGCCGTCCGG AACGTTGCAT GCGTTCGCCG CCATCGACCG CCGGTTCGTC
TGGCTCGGCC ACGCGCTGCC GATGCTGCTT GCGGTGGCCG GCGTGGTTGC CGGATCGAGC
TTGCTGATTG CGCTCGCCGG CGTGCTGGCC GCCGTTGCGG GAGGCTGGTT CAAATACACG
CTGATCTGCC GTGCCGGATT CACCCAGGGG TTTGCCCTGC CACAGACGCC CGAGCGCGGC
GGCGGCGCGG CGGGTGCGGG CATCCAGCCG GGGTGGACGC GCGCTTAA
|
|---|
| Protein sequence | MSRRDKIIDR MMPRQQTYWD ARAAINFICV GAGGGLLFVT ALASPAGDDL RPLLVLALAL
VGTGMTAVWF EIGRPLRAFN VYRNAATSWM TREAIIVLLL VVSAAAAIVF DLRAALAIAG
LLGLAVAFAQ GRILRAQKGI PAWRCSICVS MIVVSGLTEG AGLLSLAALY WPALLPFGIL
LAGLAGVRLL VWRNYFATLR RDGAPSGTLH AFAAIDRRFV WLGHALPMLL AVAGVVAGSS
LLIALAGVLA AVAGGWFKYT LICRAGFTQG FALPQTPERG GGAAGAGIQP GWTRA
|
|---|
| |