Gene RPD_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1493 
Symbol 
ID4021972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1662935 
End bp1663435 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID637961687 
Productresponse regulator receiver 
Protein accessionYP_568631 
Protein GI91975972 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC GCGAACACGT CGCAGCGCAT CAGCAGATCG GTGCCGACAA ACTGCTCGGG 
CTGCTGAATC TCCTGGTGGT GGACGACGAC CCGATGCAGC GCATGTTGAT TGCCGGCGCC
GCCGAAAAGG CAGGATATAC GGTCACCCAC GCGGCCTCCT GCGCCGAGGG TATCGCTTTG
TTCCGTGATC GGAGCTTCGA CTGCGTGACT CTCGACCTCA TGCTCGATGA CGGTGACGGC
GCCGACGTTA TGCGGGCGAT GGCTGCCGCC CGCTACAGCG GCCCGATGAT TGTGATCAGC
GGGATGGACT CGGAACGCCG CCGCGCCTCG CGGGCTCTCG CCCGTTCGCT CGGGATGGAC
CTTCTGCAGA GTTTCCCAAA GCCGATCGAC CTTGCTGCTC TACGGATCTC GCTGGCCAAC
CTCCGAAGCA ACGTTGCCGG CTTGCCGATT GTTCACTCAT GGGGCGAGGT TTGCGGTCCA
CGGTTCGATC GTACCGGCTG A
 
Protein sequence
MDTREHVAAH QQIGADKLLG LLNLLVVDDD PMQRMLIAGA AEKAGYTVTH AASCAEGIAL 
FRDRSFDCVT LDLMLDDGDG ADVMRAMAAA RYSGPMIVIS GMDSERRRAS RALARSLGMD
LLQSFPKPID LAALRISLAN LRSNVAGLPI VHSWGEVCGP RFDRTG