| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1477 |
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| Symbol | |
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| ID | 4021956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1644739 |
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| End bp | 1645962 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961671 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_568615 |
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| Protein GI | 91975956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCCTTG GTTGCGCAAT GTTGAGTATC CCGACGCTCT GGGTTGTCTT CCTGGTCAAT
TTCCTCGCGC TGGGCCTCGT CTGGACCCAC GTGATGCGCA GCTATCCCAG TTTCACGCCG
GCGCGTTACT GGACCGCATC CTGCTTCGTC GTCTCGCTCG GCGCAGTCTT CGGCATGCTG
CGGGGCGTGT TGGACACAAA GGTGATGCTG ATCGCGGGCG GCGGCGCCGT CGCCTTCGCG
GCCTTCCTGA TCTTGATGGG AATCTACCGC TTCTACGGCC GGCGTTTGAG CTGGTGGCTT
CCGCTAAGCA TGACCGCCTT TTGCGTCGGG GGTCTCGCCT TCTTTCTTCT GGTTGTCGAC
TCGATGGCGA CGAGGATCGT GATCTACTCG CTCTCCCAGG CGGTGCCGCT GGCGATGACG
CTGCCGCTGA CGATGTCGCG CACAGCCCAC CGCAATCCCG GCGCACGGAT GGCCGGCACG
GTGGCGATCC TGATGCTCGC GACCTACACG GTCCGCTCGG TCGCTGCGAT GATGGGCGTC
GGCGGCGAAT TGTCGATCAT CGAGTTCAAT AATTTCCAGG CCTCGCTGGT TCTGGCGCTG
GTGTTCCTGT CGATGACGCT GAACTTCGCC TTCATGCTGA TGGCGATCGA CCGGCTGCGG
TCCGAGGTCG AAAATCTCGC GCTGCTCGAC GACCTGACCG GCATCGCCAA CCGCCGCCAC
CTGCTGCAGC GGATGGCCAA ACAGTGCCAG ATCTCGACGC AGACCGGCGA ACCCTTCACG
GTGCTGGCGA TCGACCTCGA CGGCTTCAAG GCCATCAATG ACGGCCACGG CCACGCGGCG
GGCGACGAAT GCCTGCGACG GTTCTCACGC GCCACGCAGA CCCGACTGCG TCCCGGCGAT
CTTCTGGCGC GCGCCGGCGG CGACGAGTTC TGTGTGGTGA TGCCGGCGAC CACCTTGCGC
GAAGGCGCGA TGATCGCCCG CCACATCCTC GAGGAAAGTC GCGCGCTGTC GGCGCGGGGT
AAAGACGACG GGATCAACAT CGCCGCATCG ATCGGCGTGG CGCAGTGGAC GCAGCAAATC
GGTATGCATC CCGAGCGGCT GATCGCGGCG GCGGACGCGG CGCTGTACAA TGCGAAGAAA
CTCGGCAAGG ATCGCTATGC GGTCCATGAA CTGGCGCCGG AACCTCCGCC TCCCGCATTC
GAGCCATGGC GCAAAACCGC CTGA
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| Protein sequence | MRLGCAMLSI PTLWVVFLVN FLALGLVWTH VMRSYPSFTP ARYWTASCFV VSLGAVFGML
RGVLDTKVML IAGGGAVAFA AFLILMGIYR FYGRRLSWWL PLSMTAFCVG GLAFFLLVVD
SMATRIVIYS LSQAVPLAMT LPLTMSRTAH RNPGARMAGT VAILMLATYT VRSVAAMMGV
GGELSIIEFN NFQASLVLAL VFLSMTLNFA FMLMAIDRLR SEVENLALLD DLTGIANRRH
LLQRMAKQCQ ISTQTGEPFT VLAIDLDGFK AINDGHGHAA GDECLRRFSR ATQTRLRPGD
LLARAGGDEF CVVMPATTLR EGAMIARHIL EESRALSARG KDDGINIAAS IGVAQWTQQI
GMHPERLIAA ADAALYNAKK LGKDRYAVHE LAPEPPPPAF EPWRKTA
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