Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1430 |
Symbol | |
ID | 4021907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1595044 |
End bp | 1596192 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961622 |
Product | spermidine/putrescine ABC transporter ATP-binding subunit |
Protein accession | YP_568568 |
Protein GI | 91975909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.444326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA ACGTTGCAAA GCGCAGCGCA CCCGCTGATG CCTCGGGTGC GCCGCTCCTT CAAATCGAAG CGGTCGAGAA GCGATTCGGC GGCTTCGTCG CGGTGAACAG GCTGTCGCTC GATATCCGGG CCGGCGAGTT TTTCGCGCTG CTCGGGCCGA GCGGCTGCGG CAAAACCACG CTGCTGCGGA TGCTGGCCGG TTTCGAGACG CCCGACAGCG GCCGCATCCT GCTCGACGGG CAGGACATCG CTGCGGTGCT GCCGCATCAG CGCCCGGTCA ACATGATGTT CCAGAACTAC GCGCTGTTTC CGCATTTGTC GGTCGCCAAC AACATCGCCT TCGGCCTGAA GCGCGCCGGT CTGCCGGGCC GCGAGATCAG GGAGCGCGTC GCCGAGATGG TGGCGCTGGT GAAGCTCGAA GGCATGGAGC GGCGAAAGCC CGATCAGCTT TCCGGCGGCC AGCAGCAGCG CGTGGCGCTG GCGCGTGCGC TGGCGCGCCG ACCGCGCCTG CTGCTGCTCG ACGAGCCGCT GGCGGCGCTC GACAAGAAGC TGCGCGAGAG CACCCAGCTC GAACTGATGG CGCTGCAGAA GCGGCTCGGC ATGACGTTCA TCATCGTCAC GCACGATCAG GACGAAGCCA TGACCGTGGC CGATCGCATC GGCGTGATGC AGTCCGGCCG CCTCGCGCAG GTCGCGACGC CGCGGCAGCT CTACGAGACT CCGGCGTCGC GGTGGGTCGC CGAGTTCGTC GGCGACGTCA ACATGCTCGA AGGCGCGATC GAGGCGCGGG ATCACGGCCG TCTCACGGTC GCGACCGAAG GCGCCGGGAG GATCAGCATC GCCGAGCCAC GTCAGCCGAT CGAGGCGACC TCGGTGTGCA TCGCGATCCG GCCGGAGAAG ATCAAGCTGT CGCGGCGCGG ACCCGCCGCC GACATCGACC ACGCCGATGC GATGAACCGG CTCGACGGCG AGGTCGCCGA GGTCGGCTAT TATGGCGGGC TGACCAGCTA CAAGATCAGA CTCGATACCG GCGCGACGCT GCTCGCCAAG ATGGCCAACA CCACCCGGTT GGATGCCGAC GCCTATCGCG CCGGCCAGCA CGTCGTGGCG TGGTTTGCGC CCGATGATTG CGTGGCGCTG GACAGATGA
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Protein sequence | MIENVAKRSA PADASGAPLL QIEAVEKRFG GFVAVNRLSL DIRAGEFFAL LGPSGCGKTT LLRMLAGFET PDSGRILLDG QDIAAVLPHQ RPVNMMFQNY ALFPHLSVAN NIAFGLKRAG LPGREIRERV AEMVALVKLE GMERRKPDQL SGGQQQRVAL ARALARRPRL LLLDEPLAAL DKKLRESTQL ELMALQKRLG MTFIIVTHDQ DEAMTVADRI GVMQSGRLAQ VATPRQLYET PASRWVAEFV GDVNMLEGAI EARDHGRLTV ATEGAGRISI AEPRQPIEAT SVCIAIRPEK IKLSRRGPAA DIDHADAMNR LDGEVAEVGY YGGLTSYKIR LDTGATLLAK MANTTRLDAD AYRAGQHVVA WFAPDDCVAL DR
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