Gene RPD_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1404 
Symbol 
ID4021881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1569709 
End bp1570002 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content64% 
IMG OID637961596 
Producthypothetical protein 
Protein accessionYP_568542 
Protein GI91975883 
COG category[S] Function unknown 
COG ID[COG3492] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.932563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA ACACACGGAC CGAACTCGAA GCTGCGGCGT TTCGGCGGCT GGTGGCGCAT 
CTGCGCGAGC GCAGCGACGT CCAGAACATC GACCTGATGA ATCTCGCCGG GTTCTGTCGC
AACTGCCTGT CGAACTGGCT GAAGGAGGCC GCCGACGCGC AGGGCGTCGC GCTGAGCCGT
GACGAGAGCC GTGAGGCGGT CTACGGCATG TCTTACGATG CGTGGAAAGC GCAACATCAG
AGCGAAGCGA CGCCGGCGCA GCTCGACGCG TTCAAGAAAA CCCACCGCCA CTGA
 
Protein sequence
MDDNTRTELE AAAFRRLVAH LRERSDVQNI DLMNLAGFCR NCLSNWLKEA ADAQGVALSR 
DESREAVYGM SYDAWKAQHQ SEATPAQLDA FKKTHRH