Gene RPD_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1374 
Symbol 
ID4021851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1543102 
End bp1543302 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content60% 
IMG OID637961567 
ProductCsbD-like 
Protein accessionYP_568513 
Protein GI91975854 
COG category[S] Function unknown 
COG ID[COG3237] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.361171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGG ACCGCGTTGA AGGCAACTGG AAGCAGTTCA AGGGGAACGT CAAAGAGAAG 
TGGGGCAAAC TCACCGACGA CGATCTCGAT GTGATCGCCG GCCGCCGCGA CCAGCTCGAA
GGCAAGCTGC AGGAGCGCTA TGGCTTCGCC AAGGAGCAGG TTCGCACCGA CGTCGACGCC
TGGTTCAAAT CCCTGCCCTG A
 
Protein sequence
MNWDRVEGNW KQFKGNVKEK WGKLTDDDLD VIAGRRDQLE GKLQERYGFA KEQVRTDVDA 
WFKSLP