Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1372 |
Symbol | |
ID | 4021849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1541887 |
End bp | 1542552 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961565 |
Product | hypothetical protein |
Protein accession | YP_568511 |
Protein GI | 91975852 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.425718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCGCT CTGCTGCGAG AATAATCGGG ATTGGATGCG TCGCGTGGCT GTCGGTGGCG GGCATGGACT CGGGGGCGCA GGCACAGGAC TTTTTCTCGG CGCTGTTCCA TGGATCTCAA CCGTCGACGC GCGGCTATGC GCCGGAGCGC GCAATTCCGT TCGCCATCGA AGGCGACTAT GCGCCACGCC TGCCTCGCTA CAGCCCGCGC GCTTACAGCC CGCGCGTGCA CGCCAGCGGC GGTCAGGCCT ATTGCGTCCG GACTTGCGAC GGGCGTTATT TCCCGATCTC GGCCACAGGC GGAGAGAGCA AAAACGAGAC CTGCACCAAT CTGTGTCCCG CGAGCGACAC GAAGGTAGTT TATGGCTCGG GCATCGATGG TGCCCGCACG TCGAGCGGCA AGTCGTATTC GGAACTACCG AACGCTTTCA AGTATCGCAC CGAGATCGTG GCCGGCTGCA CCTGTAACGG CAAGGATCAT TTCGGCCTGG CGCAGATCAA GATCGAAGAC GATCCGACCG TGCGCAAGGG CGACATCGTC GCGAGCGAGG ACGGCCTGAA GGTCGCCGGA AGAACCGACC GCCGCGAAGG CGCGGTCAAT TTCTCGCCTG CGCCGGCGTC GATCCGCGCC GTTTATGGCA GGGCGCCTGT GGTGGCGGCG AACTGA
|
Protein sequence | MRRSAARIIG IGCVAWLSVA GMDSGAQAQD FFSALFHGSQ PSTRGYAPER AIPFAIEGDY APRLPRYSPR AYSPRVHASG GQAYCVRTCD GRYFPISATG GESKNETCTN LCPASDTKVV YGSGIDGART SSGKSYSELP NAFKYRTEIV AGCTCNGKDH FGLAQIKIED DPTVRKGDIV ASEDGLKVAG RTDRREGAVN FSPAPASIRA VYGRAPVVAA N
|
| |