Gene RPD_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1372 
Symbol 
ID4021849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1541887 
End bp1542552 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID637961565 
Producthypothetical protein 
Protein accessionYP_568511 
Protein GI91975852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.425718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT CTGCTGCGAG AATAATCGGG ATTGGATGCG TCGCGTGGCT GTCGGTGGCG 
GGCATGGACT CGGGGGCGCA GGCACAGGAC TTTTTCTCGG CGCTGTTCCA TGGATCTCAA
CCGTCGACGC GCGGCTATGC GCCGGAGCGC GCAATTCCGT TCGCCATCGA AGGCGACTAT
GCGCCACGCC TGCCTCGCTA CAGCCCGCGC GCTTACAGCC CGCGCGTGCA CGCCAGCGGC
GGTCAGGCCT ATTGCGTCCG GACTTGCGAC GGGCGTTATT TCCCGATCTC GGCCACAGGC
GGAGAGAGCA AAAACGAGAC CTGCACCAAT CTGTGTCCCG CGAGCGACAC GAAGGTAGTT
TATGGCTCGG GCATCGATGG TGCCCGCACG TCGAGCGGCA AGTCGTATTC GGAACTACCG
AACGCTTTCA AGTATCGCAC CGAGATCGTG GCCGGCTGCA CCTGTAACGG CAAGGATCAT
TTCGGCCTGG CGCAGATCAA GATCGAAGAC GATCCGACCG TGCGCAAGGG CGACATCGTC
GCGAGCGAGG ACGGCCTGAA GGTCGCCGGA AGAACCGACC GCCGCGAAGG CGCGGTCAAT
TTCTCGCCTG CGCCGGCGTC GATCCGCGCC GTTTATGGCA GGGCGCCTGT GGTGGCGGCG
AACTGA
 
Protein sequence
MRRSAARIIG IGCVAWLSVA GMDSGAQAQD FFSALFHGSQ PSTRGYAPER AIPFAIEGDY 
APRLPRYSPR AYSPRVHASG GQAYCVRTCD GRYFPISATG GESKNETCTN LCPASDTKVV
YGSGIDGART SSGKSYSELP NAFKYRTEIV AGCTCNGKDH FGLAQIKIED DPTVRKGDIV
ASEDGLKVAG RTDRREGAVN FSPAPASIRA VYGRAPVVAA N