| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1365 |
|---|
| Symbol | |
|---|
| ID | 4021842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1534981 |
|---|
| End bp | 1536636 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637961558 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_568504 |
|---|
| Protein GI | 91975845 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCGGC TGGGTTTCAT CATCGCTCTG GTTGCGATCG TGGGGATGCT ACTCTCCGGT
TTCGCGGCCT ATCGGATCTA CGATCAAGAG TCGGCGATCG AGCGAATTGC GCTTGGGCGG
GCAATCGACG TTCATGCCAG CCAGGTACAG GACCGATTGA CCGAGCGCGA ACTACTCGGA
AGAGTTGCAT CCGGGCTGTT CCGCACGCCG GCTGTTATCA AGGCCGACAT GCTGAAGCCG
CTGCGCTCGT CGATCTACGC GTTCAAGACG GACTTCCAAC TGGCAAGCTG GGTGGTCAGG
CTGAAGGCCG ATGAGTTTTC CGCCGCCCAG GCCGAGCTGG CAAAAGCGGG TTTCGCCGAC
ACCACGATCC GGCATTCCGA CGGCGCTGCG ATTGATCCCG CGACGCTCAA GGAGCCGGTC
GACGTTGTCA TGGACATCGA GCCGCGCAAC GCCGAGACCG TCGCACTGCC GGGCCGTTCG
CTCGACGATC ATCCCGTGCT TGGGCAGATG TTCGCCCGCT CGCTCGCCGC AGGCAAACCC
GAGGCCTCCG ATCCAATGCA CCTCAACGGT CCCGATGGTC CGATCGGGGT GGTTCTCGCC
GCGCCGGTCA TGACGGACGA CTCATCGGCG GTGATCGGAT TCATCACCTT CTCCTACGAT
CTCTCGGCGC TGATGCTGAC CAACGACGAT ATGTCGTTGT TCTCGGTGGT TCTGAAGGAC
CCTCGGCAGG CCGATGTCGA ACTGATTGCT GATGATCGCG GCAAGGTCAC CGAGCGGCCG
GCGCGCCCGG GCGGCGAGGG GCCGACGATC GTCAGGACCG TGACGTTCGG CGCCCGCGAC
TGGTCGCTGG CCTATTACGC GCGCGTCAAT CCGTTCGTCC GCGCCCAACA GGTCGCCGCC
ATCGTTGCAG CGGTCGGTCT GGCGCTGACC ATCATCGTCT GCGGCTTGTT CGGCTACGTC
AGCAACAGCA ATCTCAGGCT GCGACGCGAG ATCGAGATCA GGATCGGCTT CGAGCGCCGG
CTGAACGCGG TGATCGACGA GCTCAATCAC CGGGTCAAAA ACATCCTCGC CGTGATCCAG
TCGATCGTGA CCCGCACGCT TCGGAACGGT TCGGACATGG ATGTCGCCCG CGAGCTGTTG
ATCGGGCGGA TTCATGCCAT GTCGAACGTC GTCTCGCTGC TGAGCGAGAG CCAGTGGCAG
GGCGTATTGC TGAAGGGGCT GTTCGCGGCG CGCGCGATTC CGCATTCGGA CCGCATCGCG
GTGAATGGGC CCGACATCGC GGTGAGCGCC CGCGCGGCGC AGAGCCTGTC GTTGCTGTTT
TTCGAACTCG CCTCGCATTC CGACGAGGGG CTGTCGCTGG TCGGAAAGCA CCCGCATATC
GTCGCGAGCT GGGAGGTGAT CGGCAAGGGC GCCGACCCCA TTTTCAACTT TCGCTGGGAG
GAGTTCAATA CCAGCGAAGC GACGCGACGG GCAGAAAGCG AGTTCGGCGT TATCCTGTTG
GATCGCGTTG CGCCGGAAGC GCTCGGCGGC ACCGCCAAGC GCTATTTCAC GGATGTCAGC
TATGTCTATG AGCTGACGGC ACCGATGGAT ACGGTCGTTG ATATGAACGA ACGCGATCGC
ACCGGCCAGA TCTCGGCGCC GCTGCGGAAC AGATGA
|
|---|
| Protein sequence | MVRLGFIIAL VAIVGMLLSG FAAYRIYDQE SAIERIALGR AIDVHASQVQ DRLTERELLG
RVASGLFRTP AVIKADMLKP LRSSIYAFKT DFQLASWVVR LKADEFSAAQ AELAKAGFAD
TTIRHSDGAA IDPATLKEPV DVVMDIEPRN AETVALPGRS LDDHPVLGQM FARSLAAGKP
EASDPMHLNG PDGPIGVVLA APVMTDDSSA VIGFITFSYD LSALMLTNDD MSLFSVVLKD
PRQADVELIA DDRGKVTERP ARPGGEGPTI VRTVTFGARD WSLAYYARVN PFVRAQQVAA
IVAAVGLALT IIVCGLFGYV SNSNLRLRRE IEIRIGFERR LNAVIDELNH RVKNILAVIQ
SIVTRTLRNG SDMDVARELL IGRIHAMSNV VSLLSESQWQ GVLLKGLFAA RAIPHSDRIA
VNGPDIAVSA RAAQSLSLLF FELASHSDEG LSLVGKHPHI VASWEVIGKG ADPIFNFRWE
EFNTSEATRR AESEFGVILL DRVAPEALGG TAKRYFTDVS YVYELTAPMD TVVDMNERDR
TGQISAPLRN R
|
|---|
| |