| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1336 |
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| Symbol | |
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| ID | 4021813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1503085 |
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| End bp | 1505157 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961529 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_568475 |
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| Protein GI | 91975816 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA TCAGCTTGCT TCCCTTCGTG CCGGTGCCAG CGCTGGTTGG CTTCATCGTG
TTGTCGCTGA CGCCGGCGAC GCTGTCGCGC GCCGTCGTCA TTGCGATCGG CGTCGGCGCA
GCGGTGCTGC CGGCAATTCT GTTCGCGCCG GTCGCGCTGT CCTGCCTCGA CGGCGCCTGC
GTGTCGGGCG CGGTGGCGCC GATCCTGTCG ATCGACGTCG GCGTGTTCGT CGCGCAAATC
GCGATGTCGC TCGATCCGCT CAGCATGGTC ACCGGCGGCA CCGTCGCGGT GGTCGCCGCG
CTGGTGCTGA TCTATTCCGG CGCCTATATG GGCTCCGAGC CGCTGCCCGA GCTGCGCCGT
TACTTCGCGC TGATGAATCT GTTTCTCGCC GGCATGCTGG CGGTGGTGTT CGCCGGCGAT
GTCATCCTGC TGTTCCTCGG CTGGGAAACC ATCGGCCTGT GCAGCTTCAT GCTGATCGCT
TTCTACACCA AGCTGCCGAA GGCGGTGTCG GCCGGGCGCA AGGCGCTGAT CACCACGCGC
ATCGCCGACA CCATGCTGCT GGCCGGCCTG ATGATGCTGT TCCTGTCCGC CGGCACCACG
CGGCTCGACG GCATGCTCGC CGCGGTGCCG TCGATCGACC CGTGGCGGCT GGCGCCGATC
GCCGGCCTGA TCGCGCTTGG CGCACTCGGC AAATCGGCGC AGTTTCCGTT TCACACCTGG
TTGCCGAGCG CGATGGCGGG CCCGACGCCG GTGTCGGCGC TGCTGCATTC CGCGACCATG
GTGGCTGCCG GCGTGATCCT GCTCGCGCGG CTCGCGCCGC TGTTCGCCGC GGCGCCGGAA
ATCTCCGCCA TGGTGGCGAT GCTCGGCATC CTGACCGCGG CGTTCGGCGC GCTGATCGCG
GTGATCCAGC CCGACATCAA GAAGCTGCTG GCCTTCTCCA CGATGAGCCA GATCGGCTTC
ATGGTGCTGG CGCTCGGGCT CGGTGCGCCG GCGGTGGCGC TGGCGCATTT CGCGATCCAC
GCCGCGTTCA AATCGCTGCT GTTCCTCAGC GCCGGCGTGA TGAGCCATGC CTCGGGCGGC
TCGACCGCGA TCGAGGCGCT GCGCGGTGCG CGCTATCGTC AGCCCTGGGC GTTCTGGAGC
TTCGCGATCG GCGCCGCGTC GCTGGCTGGC CTGCCGGTGA TCACCGCCGG CTGGTACTCC
AAGGAAGCGG TGCTCGCCGC GGTGTGGAGC AGCGGACCGT GGGGCGTGCC GCTGTGGTTG
CTCGCCGCGA TTGCGGCGAT GCTGACCGCC ACCTATGCCT TCCGCGTCGT GTTCATCGCC
GGCAGTCAGT CCGCCGATCT CGCAGCGCCG CCCTGGGGCG GCCTCGCGGT GCTGGTGCCG
CTCGTCGTGC TGGCCACGGT GGCGGTGGTC GGCGGCCTGT CGGTCGGTGC GCTGATCAGT
TTCGCCGGCG GCCCGCCGGA GGACATTCCG CTGTTGCTGG CGCTGCTCGG CGCCGCCGCG
CCGATCCTCG GCGTGTTGCT CGCGCGACGA TTCGTCCGCC GTCCGCGTGA GCTCGAGCGG
ATCGCGGCCC GGTTGCGGCA CGTCCGCGCA TTCCGGATCG AGATCTTGTA CTATTACTAC
TTCGTGCGGC GCTTCCGGCA CGTCGCCACG GTACTCGGCA ACGCTGAAGG CACCGAAGCA
GTCGCACAAG CCGCGGCGCT GCGCCGCGAG GGCATTGACG TGCCCGGAAC GGTAGCCGAC
GATCCGGCCG CGCGCGCCTT CGGCGTAGAC GCAACGAAGC CGGATTTCAT CGCGCGCGTG
ACCGACGGGC AGACGCCGAT GGTGCGTCTC GTCTCCGGCG ATCCGGTCGG ACGGATTCTG
ATTGCCGTCG CGCGGGTGTT CGTCGGCAGT TTTGTCGCGC GCTTCAGTCC CGATCAGATC
GATCGGGCCT GGATGGGCTT CGCGGGCGGT TTCGGCCATG CCTGGGCACA GGCGCGGCGG
ATACAGACCG GCCGCGTTCG CGATCACTCG CTCTGGATTG CGCTCGGTTG CGTAGGACTT
CTGTTGTTTG CCTGGGGGAC GTCATGGCGC TGA
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| Protein sequence | MSMISLLPFV PVPALVGFIV LSLTPATLSR AVVIAIGVGA AVLPAILFAP VALSCLDGAC
VSGAVAPILS IDVGVFVAQI AMSLDPLSMV TGGTVAVVAA LVLIYSGAYM GSEPLPELRR
YFALMNLFLA GMLAVVFAGD VILLFLGWET IGLCSFMLIA FYTKLPKAVS AGRKALITTR
IADTMLLAGL MMLFLSAGTT RLDGMLAAVP SIDPWRLAPI AGLIALGALG KSAQFPFHTW
LPSAMAGPTP VSALLHSATM VAAGVILLAR LAPLFAAAPE ISAMVAMLGI LTAAFGALIA
VIQPDIKKLL AFSTMSQIGF MVLALGLGAP AVALAHFAIH AAFKSLLFLS AGVMSHASGG
STAIEALRGA RYRQPWAFWS FAIGAASLAG LPVITAGWYS KEAVLAAVWS SGPWGVPLWL
LAAIAAMLTA TYAFRVVFIA GSQSADLAAP PWGGLAVLVP LVVLATVAVV GGLSVGALIS
FAGGPPEDIP LLLALLGAAA PILGVLLARR FVRRPRELER IAARLRHVRA FRIEILYYYY
FVRRFRHVAT VLGNAEGTEA VAQAAALRRE GIDVPGTVAD DPAARAFGVD ATKPDFIARV
TDGQTPMVRL VSGDPVGRIL IAVARVFVGS FVARFSPDQI DRAWMGFAGG FGHAWAQARR
IQTGRVRDHS LWIALGCVGL LLFAWGTSWR
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