| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1302 |
|---|
| Symbol | |
|---|
| ID | 4021779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1466896 |
|---|
| End bp | 1467423 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637961495 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_568441 |
|---|
| Protein GI | 91975782 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.918656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAG AGACTTCGGC GGAACCGACA CGCCGTGATT TTCTCTACAT CGCAACCGGC
GCCGTGGCTG CAGTCGGCGC AGCTGCGACC GTGTGGCCGT TCATCTCGCA GATGAACCCG
GACGCATCGA CGATCGCCGC CGGCGCGCCG ATCGAAGTCG ATCTGACCCC GATCGCTGAG
GGTCAAGACA TCAAAGTGTT CTGGCGCGGC AAGCCGATCT ACATCATGAA CCGCACCAAG
AAGCAGGTCG AAGAAGCGCG TTCGGTGAGC CTGTCGGCAT TGCCCGACCC GCAGACCGAT
CAGGACCGCA CCAAGGAAGG CTACGAGCAG TGGCTTGTCG TGGTCGGCAT CTGCACTCAC
CTTGGCTGCA TTCCGATCGC GCATGAAGGC CTGTTCGACG GCTTTTTCTG CCCCTGCCAC
GGTTCGCAAT ACGATTCCTC CGGCCGAATC CGCCAAGGGC CGGCCCCGGC GAACCTGCCG
GTCCCGCCGT ATCAATTCGT CTCCGACACC AAAATCCAGA TCGGCTGA
|
|---|
| Protein sequence | MTTETSAEPT RRDFLYIATG AVAAVGAAAT VWPFISQMNP DASTIAAGAP IEVDLTPIAE
GQDIKVFWRG KPIYIMNRTK KQVEEARSVS LSALPDPQTD QDRTKEGYEQ WLVVVGICTH
LGCIPIAHEG LFDGFFCPCH GSQYDSSGRI RQGPAPANLP VPPYQFVSDT KIQIG
|
|---|
| |