| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1293 |
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| Symbol | |
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| ID | 4021770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1457682 |
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| End bp | 1460507 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637961486 |
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| Product | double-transmembrane region-like |
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| Protein accession | YP_568432 |
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| Protein GI | 91975773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.397525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCG GTTTGCCTCT CTCCTTCGCC GAACCGTTGC TGCTGATCGG GCTCGTTGCG
CTGCCGGCGC TGTGGTGGTT GCTGCGGGTA ACGCCGCCGC GGCCACGCCG CATCGACTTT
CCGCCGACCC GGCTGCTGTT CGAGATCGCC CCCAGGGAAG AAACGCCGTC GCGCACGCCG
TGGTGGCTGA CCGCGTTGCG GATGCTCGCC GCGGCGCTGG TGATCATCGC GCTCGCCGGC
CCGATCTGGA ATCCGCAGAC CGCCGCAGGC AACAGCCGCG CGCCGCTGCT GATCATGCTC
GACGACGGCT GGAGTTCGGC GTCGAACTGG GAGATGCGGA TCAAGGCCGC CGACGAACTG
ATCGCCGAAG CCGATAGTTC GCGCCGCGCC GTCGCGCTGG CGCCGCTGTC GGAAGCGACG
CGCGATCCGA CCTTGATGCC GGCGGGCACC GCGCGGGTGT CGCTGCGCCA GCTCGCGCCG
AAACCCTATG CGGTCGAACG CGTCGAGGCG CTGCCGCCGA TCGAGCGCTT CCTGAAGGCC
TCCGGCGATG CCGAGATCGT CTGGCTGACT GACGGCGTCG ACACCGGACG CGGCGGCGAA
TTCGTCGAGG GCCTGAACAA ACTGGTGCAG AACCGCAGCG TCACCATCGT CGAGGGCGGC
GCGCCGCCGA CCCATGCGCT CGCCGCCGCG GAGAACGCTG CCGCCAAAAT GACGGTCAAG
GTGCTGCGTT CGCAGGCCGG CGGCCTCGAC ACCGGCACGG TGCGGGCGCT CGACGCCAAG
GGTGCGCCGA TCGGCGAGGC GCGCTTCAGT TTTCCGCCGC AGGACCGCGA GACCGATGCC
GCGTTCGAGC TGCCGGTCGA GCTGCGCAAC GATATCGCGC GGCTGGAAAT CGCCGGCGAA
CGCTCTGCCG GCGCCGTGCA ATTGCTCGAC AAACGCTGGC GCCGCCGCGC CATCGGCATC
GTCTCCGGCG CGAGCTCCGA CACCGCGCAG CCTCTGCTGG CGCCGACCTT CTACCTCGCC
CGCGCGCTGT CGCCATTCGC CGACGTCCGG CTCGGCGATC GCGCCGCGCC GCAGCAGGCC
ATTGCGCAGT TTCTCGATCA GAAACTGCCG ATGATGGTGA TGGCCGATGT CGGCGCGCTG
TCGCCGGAAC TCCGCCAGCG GCTCGACGCC TGGATCGAAC AGGGCGGCGT GCTGGTGCGG
TTCGCGGGGC CACGGCTTGC GCGCCAGGAC GACGACGATC TGGTGCCGGT GAAGCTGCGC
CGCGGCGGCC GCAGCCTCGG CGGCAGCCTG ACCTGGGAGA AGCCGCAGCA CCTCGCTTCC
TTCGCGGCCG ATGGCCCGTT CGCGGGGATC GCCGTGCCGG CCGACGTCAC CGTCAATCGC
CAGGTGCTGG CCGAGCCCGA CGCGGTGCTG GCGACCAAAA GCTGGGCCTC GCTCGCCGAT
GGTACGCCGC TGGTCACCGG CGAACATCGC GGCAAAGGCC TGGTGACGCT GTTCCACGTC
AGCGCCGACA TGCGCTGGTC CGATCTGCCA ATGTCCGGCA CCTTCGTCGA AATGCTGCGG
AGGCTGGTCG ACATGTCCGG CTACACCTCG ACGCCGGGCG CCGGCGTCGC CGCCGAGACC
AACGCCGCCG AGACCGTGGC GCCGCTGCGC ACGCTCGACG GCTTCGGCGC ATTCGGCCCG
CCGCCGGCCT CGGCCAAGCC GATCCCGGTC GCGTACCGCG ACCGCAGCAG CGCCGACCAC
CCACCCGGCT TCTACGGCCC GGCCGACGGT CCGCTCGCCG TGAATACGTT GGCCGCCGCC
GACCGCATCG CGCCGCTCGA CACCGCGGCG ATCAAAGCGC GGCGCGCGGA CTACACCAAT
GCCGAACCGC GCGATCTGCG CGGGATTCTG CTCGCCTCCT CGCTGGGCCT GTTCTTGCTC
GACGCGCTGA TCGTGGCGCT GCTCGGCGGC GGTCTGGTCG CGCTGCTGAT GCGCCGCCGC
CGCGCGGCTA CCGCCGCATT GGCGCTGATG CTCGCGCTGC CGCTGGCGAC GACGCCGTGG
CCGTCTTATG CCGACGGCCC AAAGGATGAG TTCGCGATCA AGTCGACGTC GCAAACTCAC
CTTGCCTATG TGGTGACCGG CAATCCGGAC GTGGATTCGA TCGTCAAGGC CGGGATGAGC
GGGCTGACGC TGTTCCTGGC GCAGCGCACC GCGCTCGAAG CCGGCGAGCC GATCGGCATC
GATCCGGCGC GCGACGAGCT GTCGTTCTTC CCGCTGATCT ATTGGCCGGT GATCGCGGGT
GCGCCGAAGC CGCCGCAGGA CGCGCTCAAC AAGATCGACG CCTATATGAA GCAGGGCGGC
ACCGTGATCT TCGACACCCG CGACGCGATC GAGGCGCCGG CGGGCCCGAA CGGCGCATCG
CAGACGCCCG GCATGTTGAC GCTGCGCAAC GTGTTGTCCT CGCTCGACAT CCCCGAGCTT
GAACCGGTGC CGCGCGAGCA CGTGCTGACC AAAACATTCT ATCTGCTGCG CGATTTCCCC
GGCCGTTTCA CCGCAGGCGA GACCTGGGTC GAGGTGCTGC CGCGCGAGAA CGACGACGAG
GACTCCGCGC GGCCGGCGCG CGGCGGCGAC GGGGTGTCGC CGATCATCAT CACCTCGAAT
GATTTCGCCG GCGCCTGGGC GATGCGGCCG GACGGCCAGC CGATGCTGCC GCTGACGCCG
GGCGAGCCGC GCCAGCGCGA ATTCGCGTTC CGCGCCGGCG TCAACATCGT GATGTACACG
CTGACCGGCA ACTACAAAGC CGACCAGGTC CACGCCCCCG CGCTGATCGA ACGGCTCGGG
CAGTGA
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| Protein sequence | MIGGLPLSFA EPLLLIGLVA LPALWWLLRV TPPRPRRIDF PPTRLLFEIA PREETPSRTP
WWLTALRMLA AALVIIALAG PIWNPQTAAG NSRAPLLIML DDGWSSASNW EMRIKAADEL
IAEADSSRRA VALAPLSEAT RDPTLMPAGT ARVSLRQLAP KPYAVERVEA LPPIERFLKA
SGDAEIVWLT DGVDTGRGGE FVEGLNKLVQ NRSVTIVEGG APPTHALAAA ENAAAKMTVK
VLRSQAGGLD TGTVRALDAK GAPIGEARFS FPPQDRETDA AFELPVELRN DIARLEIAGE
RSAGAVQLLD KRWRRRAIGI VSGASSDTAQ PLLAPTFYLA RALSPFADVR LGDRAAPQQA
IAQFLDQKLP MMVMADVGAL SPELRQRLDA WIEQGGVLVR FAGPRLARQD DDDLVPVKLR
RGGRSLGGSL TWEKPQHLAS FAADGPFAGI AVPADVTVNR QVLAEPDAVL ATKSWASLAD
GTPLVTGEHR GKGLVTLFHV SADMRWSDLP MSGTFVEMLR RLVDMSGYTS TPGAGVAAET
NAAETVAPLR TLDGFGAFGP PPASAKPIPV AYRDRSSADH PPGFYGPADG PLAVNTLAAA
DRIAPLDTAA IKARRADYTN AEPRDLRGIL LASSLGLFLL DALIVALLGG GLVALLMRRR
RAATAALALM LALPLATTPW PSYADGPKDE FAIKSTSQTH LAYVVTGNPD VDSIVKAGMS
GLTLFLAQRT ALEAGEPIGI DPARDELSFF PLIYWPVIAG APKPPQDALN KIDAYMKQGG
TVIFDTRDAI EAPAGPNGAS QTPGMLTLRN VLSSLDIPEL EPVPREHVLT KTFYLLRDFP
GRFTAGETWV EVLPRENDDE DSARPARGGD GVSPIIITSN DFAGAWAMRP DGQPMLPLTP
GEPRQREFAF RAGVNIVMYT LTGNYKADQV HAPALIERLG Q
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