Gene RPD_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1272 
Symbol 
ID4021749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1434525 
End bp1434971 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID637961465 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_568411 
Protein GI91975752 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.658036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CCTCTTTCAT GGATCTGGCG CTGGCCGCCG CGAACATCGC CGGTCGATCG 
GGCGAAGTGC CGATCGGCTG CGTCATCGTC CGCGGCGGCG AGGTGATCGC GACCGCCGGT
AACCGCACCT TGACCGACCG CGATCCGACC GCCCACGCCG AATTGCTGGC GATCCGCGAA
GCCGCGCAAA AACTCGGCAG CGAGCGGCTG CCGGACTGCG ATCTCTACGT CACGCTCGAG
CCGTGCACGA TGTGCGCCGG CGCGATCTCG TTCGCGCGGA TCCGGCGGCT GTATTTCGGC
GCATTCGATC CGAAGGGCGG CGCGGTGGAG AGCGGCGTCC GGTTCTTCGG CCAACCGACC
TGCCACCATG CGCCCGAGGT CTATTCCGGC GTCGGCGAGC GCGAAGCCGC CGCAATGCTG
CGGGCGTTTT TCAAGGCAAG GCGGTGA
 
Protein sequence
MTTPSFMDLA LAAANIAGRS GEVPIGCVIV RGGEVIATAG NRTLTDRDPT AHAELLAIRE 
AAQKLGSERL PDCDLYVTLE PCTMCAGAIS FARIRRLYFG AFDPKGGAVE SGVRFFGQPT
CHHAPEVYSG VGEREAAAML RAFFKARR