Gene RPD_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1242 
Symbol 
ID4021718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1405679 
End bp1406068 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID637961434 
Producthypothetical protein 
Protein accessionYP_568381 
Protein GI91975722 
COG category[S] Function unknown 
COG ID[COG5451] Predicted secreted protein 
TIGRFAM ID[TIGR02301] conserved hypothetical protein TIGR02301 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC GCCTGCTCGC CATTTTTCTC GTGGTTGCGA CCTGTGGCCT GGCTGCGGCG 
CTCGCTCCCG CGCGGGCGCA GGATGGCGCC GCGCCGTTCG ACGCCGACCT GCAGCGATTC
GCCGAAATCC TCGGAACACT GCATTATCTG CGCGGCGTCT GCGGCAGCAA CGAAGGCGCC
AAATGGCGCA ACGAGATGCA GGCGCTGATC GACGCCGAAA CCCCCTCCGG CGAACGCCGG
ACCCGGCTGA TCGCCGGCTT CAACCGCGGC TACAACGGGT TCCAGCAGAC CTATCGGACC
TGCACGCCGG CCGCTCGGGT GGCGATCCGC CGTTATCTCG AGGAAGGCTC GCGGATCTCC
CGCGACCTCA CCGCCCGATA CGCGAATTGA
 
Protein sequence
MLKRLLAIFL VVATCGLAAA LAPARAQDGA APFDADLQRF AEILGTLHYL RGVCGSNEGA 
KWRNEMQALI DAETPSGERR TRLIAGFNRG YNGFQQTYRT CTPAARVAIR RYLEEGSRIS
RDLTARYAN