| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1221 |
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| Symbol | glyS |
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| ID | 4021697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1379705 |
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| End bp | 1382173 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961413 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_568360 |
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| Protein GI | 91975701 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.64374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC TCCTTCTCGA ACTGTTCTCC GAAGAAATCC CGGCGCGGAT GCAGGCCAAG
GCGGCTGACG ATCTGCGCCG CATGGTGACC GAAAAGCTGG TCGCCGAGGG CCTCGTCTAT
GAGGGCGCCA AGGCGTTCGC GACGCCGCGG CGGCTGGCGT TGACGGTGCA TGGCATTCCG
GCGCGGCAGC CGGATCTGAA GGACGAGCGC AAGGGGCCGA AGGTCGGCGC GCCGGACGCC
GCCGTGCAGG GCTTTCTGAA AGCCACCGGG CTCGCCTCGC TCGACGAGGC CAAGATCCAG
CGCGATCCGA AGAAGGGTGA TTTCTACATC GCGCTGATCG AGAAGCCGGG GAGGCCTGCG
ATCGACGTGC TCGCCGACAT CCTGCCGGTG ATCGTGCGCA CCTTCCCGTG GCCGAAATCG
ATGCGCTGGG GCGAGCGTTC CGCCAAGCCC GGCGCGCTGC AATGGGTGCG GCCGCTGCAT
TCGATCGTCG CGACCTTCGG CATCGACACC GAGGAACCCG AGGTGGTGGC GTTCGACGTC
AGCGGCATCA AGGCCGGGCA GGTGACGCGC GGCCATCGCT TCATGGCGCC GGACGAGATC
AGCGTGCGCC GCTTCGAGGA CTACGAGGCG AAGCTCTATG CCGCCAAGGT CGTGCTCGAT
CCGCAGCGCC GCAAGGACAT CATTCTGGCG GATGCGAAAA CCCTGGCGCA GGCGCAGAAC
TACGAACTGG TCGAGGATCA GGGGTTGCTC GACGAAGTCT CCGGGCTGGT CGAATGGCCG
GTCGCGCTGA TGGGCTCGTT CGACGCGGAC TTCCTGTCGA TCCCCGGCGA AGTGATCCGC
GCCACCATCC GCGCCAACCA GAAGTGCTTC GTGGTCGCCG ATCCCGCGAC GGCTAAGCTG
GCCAACAAAT TCATCCTGAC ATCGAATATC GAAGCCAGCG ACGGCGGCGC CGCGATCACC
GCCGGCAACG AACGCGTGAT CCGCGCGCGG CTCTCCGACG CCAAGTTCTT CTACGACACC
GATCTGAAAA CCAAGCTGGA AGACCGGCTG CCGAAATTCG ACCAGATCGT GTTCCATGAG
AAGCTCGGCA CCCAGGCCGA GCGCATCGCC CGCATCGAAC GCCTCGCCGC CGAAATCGCA
CCGCTGGTCG GCGCCGATGT CGAGAAGGCC AGGCGCGCGG CGCGGCTGTG TAAGGCCGAT
CTGCTCACCG AAGTCGTCGG CGAATTTCCT GAGCTACAGG GCCTGATGGG CAAGTACTAC
GCGCTGGCAG CGGGCGAGGA TGCCTCCGTC GCTGCCGCCT GCGAGGACCA CTACAAGCCG
CAGGGTCCGA ACGATCGCGT CCCGACCGAT CCGGTCAGCA TCGCGGTGGC GCTCGCCGAC
AAGCTCGACA CGTTGGTCGG GTTCTGGGCG ATCGACGAAA AGCCGACCGG CAGCAAGGAC
CCCTATGCGC TGCGGCGTGC GGCGCTGGGG GTGATTAGGA TCATAGTTAC AAACAACCTT
AAGGTACGGC TTGAACCATT TCTCTTTAGT TGGGTCGTGG AGGCGACATC AGCAATCGGA
AGGAAACTCG ACCAGTCCAC TTATGAGGCC ATTAGTGGCG ACGTCCCCGT CGAACAGCAC
GTCTTCCATG CTGCTTTCAA TCAGTTTTGG GATGCTACCA TCGGCGGGGC GTTGCTTGCA
CGTGTAGGCT ATCCGGAGAA TATAACCCGT AATATGCCGT CTCCTGCGGA CCATAGGGGT
TGGACTCTGT ACATTGAAGA GCTTGGCCTT GACGACGTGG GCTTTGCCAA AACTGCTGAA
ATCTTCAAGA CGCACCTTTC GGACATCGTC TCGTCGTTCT CTGCAGCACA GGTGCTGAAA
GATGTTCGGC TTGCGGATCA TTATGTTTCA GACGACTACT TGGAGAGGTT TGGCTTCCAC
CATGTCTTTG TAAGTCAAGT TTGGTCTGAT CTCCTGAAAT TCTTAGTGGA CCGCCTCAAA
GTCCAACTCC GCGATCAAGG CGCTCGCCAC GATCTCGTCG ACGCCGTGTT CGCGCTCGAG
GGCCAGGACG ACATCCTGAT GATCGTCCGC CGCGTCGAGG CCTTAGCGGC GTTCCTCGCC
ACTGACGACG GCAAGAACCT GCTGGCCGGG ACCAAGCGCG CGGCGAATAT TCTGCGGATC
GAGGAGAAGA AGGACGGCCG CGCCTTCGAT GGCGTGCCGG ATGCGTCGCT CTACGCGCAG
GACGAGGAGA AGGCGCTGGC GGCCGCGATC GATCGGGCGC GGGCGGAGGC GACCGAGGCG
GTGGCGCGCG AAGACTTCGC CGCCGCGATG ACCGCGATGG CGGGCCTGCG GCCGGCGGTC
GATGCGTTCT TCGACAAGGT CACGGTCAAC GCGGACGACA AGGCCGTCCG CGAAAACCGC
CTGAAGCTGC TGGGCGAAAT CCGCGCCGCG ACGCGCGCGG TGGCGGATTT CTCGAAGATC
CAGGATTGA
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| Protein sequence | MPDLLLELFS EEIPARMQAK AADDLRRMVT EKLVAEGLVY EGAKAFATPR RLALTVHGIP
ARQPDLKDER KGPKVGAPDA AVQGFLKATG LASLDEAKIQ RDPKKGDFYI ALIEKPGRPA
IDVLADILPV IVRTFPWPKS MRWGERSAKP GALQWVRPLH SIVATFGIDT EEPEVVAFDV
SGIKAGQVTR GHRFMAPDEI SVRRFEDYEA KLYAAKVVLD PQRRKDIILA DAKTLAQAQN
YELVEDQGLL DEVSGLVEWP VALMGSFDAD FLSIPGEVIR ATIRANQKCF VVADPATAKL
ANKFILTSNI EASDGGAAIT AGNERVIRAR LSDAKFFYDT DLKTKLEDRL PKFDQIVFHE
KLGTQAERIA RIERLAAEIA PLVGADVEKA RRAARLCKAD LLTEVVGEFP ELQGLMGKYY
ALAAGEDASV AAACEDHYKP QGPNDRVPTD PVSIAVALAD KLDTLVGFWA IDEKPTGSKD
PYALRRAALG VIRIIVTNNL KVRLEPFLFS WVVEATSAIG RKLDQSTYEA ISGDVPVEQH
VFHAAFNQFW DATIGGALLA RVGYPENITR NMPSPADHRG WTLYIEELGL DDVGFAKTAE
IFKTHLSDIV SSFSAAQVLK DVRLADHYVS DDYLERFGFH HVFVSQVWSD LLKFLVDRLK
VQLRDQGARH DLVDAVFALE GQDDILMIVR RVEALAAFLA TDDGKNLLAG TKRAANILRI
EEKKDGRAFD GVPDASLYAQ DEEKALAAAI DRARAEATEA VAREDFAAAM TAMAGLRPAV
DAFFDKVTVN ADDKAVRENR LKLLGEIRAA TRAVADFSKI QD
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