| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1212 |
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| Symbol | |
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| ID | 4021688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1371082 |
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| End bp | 1372860 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961404 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_568351 |
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| Protein GI | 91975692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTTC ACCGACTCCG TCGCTCGATG TTTGTCGCCG TCACCGTCGC GGCACTGCCG
ATCGCGGGTC AGGCGCTGGC GCAGACCCCG GACCATCCCG CTGACAATTC GGCGCAGTTT
CCGTCCGGCC AGGATTTGCG GTCGATGACG ACGGCCGGCA GCTATCTGGC CGCCCGTCAC
GCCAGCGTCG AGCGCGACGC CGCCGCGGCG GCGGCGTTCT ATCGTTCGGC GCTGCGCACC
GATCCGAAGA ACAACGAGCT GCTCGACCGC GCCTTCATCT CGTCGCTGGC CGAAGGCAAT
ATCGACGAGG CCGTCAAGCT CGCCGATCGC ATCCTCAAGA TCGACAAGAC CAACCGCGTC
GCCCGTCTCG TGCTCGGCGC TCGGGACCTC AAGACAAAGA AATACGCGTC CGCGATTCAG
AACGTGAATC TGTCGGTCCG CGGCCCGATC ACCGACCTGA TCGCGACCCT GCTCGCGAGC
TGGGCGATGG AGGGAGCCGG CGACGTCAAG GGCGCGGTGG CCAATATCGA CAAGCTCGCC
GGTCCGGAAT GGTATCCGAT CTTCAAGGAT CTCCATTCCG GCATGATCCT CGAACTCGCG
AACCGTCAGA AGGACGCCGG CGTTCGCTTC GAACGCGCCT ACAAGCTCGA CGATTCCGCG
CTTCGGGTGA TGGACGCCTA TGCGCGCTGG CTGTCGCGCA ACAAGGACGA CAAGTCCGCG
GTGGCCGTCT ATGAGAGCTT CGACAAGAAG CTGTCCCGTC ATCCGCTGGT TGTCGAAGGC
CTGAACGACA CCAAGGCCGG CAAGAAGCTG CCGCCGCTGG TCGACAGTCC GCAGGCCGGC
GCGGCCGAGG CGCTGTACGG CATCGGCGCG TCGCTGACCC GCCGCGGCGG CGAAGACCTC
GCCCTGGTCT ATCTGCAGCT CGCGCTGTAT CTGCAGCCCG ATCACGCGCT GGCGCTGCTG
GCGCTCGGCG ACCTCTACGA GTCGGTCAAG AAGCCGCAGA TGGCGGTGAA GGTCTACGAG
CGCGTGCCGG CGAATTCGCC GCTGAAGCGC AACGCTCAAA TCCAGCTCGC CACCGATCTC
GATGCGACCG ACCGCAGCGA GGAGGCGATC AAGATCCTGA AGACCGTGAT TGCCGAAGAC
GGCAAGGATC TGGAAGCGAT CATGGCGCTC GGCAATATCG AGCGCGGCCG CAAGAAGTTC
GCCGACTGCG CCGTGACCTA TTCGCAGGGC ATCGACGCGC TGTCCGGGGC CGAGAAGAAC
AGCTGGGTGT ATTACTACTT CCGCGGTATC TGCGAGGAGC GCTCCAAGCA GTGGGCCAAG
GCCGAGATCG ACATGAAGAA GGCGCTGCAG CTGCAGCCGG AGCAGCCGCA CGTTCTCAAT
TATCTCGGCT ATTCCTGGAT CGACCAGGGC ATCAATCTCG ACGAAGCGAT GAAGATGATC
AAGCGCGCCG TCGATCAGCG TCCCGACGAC GGCTACATCG TCGACTCGCT CGGCTGGGCC
TATTATCGCA TCGGCAATTA CGAGGATGCG GTGAAGACGC TGGAACGCGC GATCGATCTG
AAGCCGGAAG ATCCGACCAT CAACGATCAT CTCGGAGACG CTTATTGGCG CGTCGGTCGC
ACGCTGGAGG CGCGTTTCCA GTGGGCGCAC GCCCGCGACC TCAAGCCCGA TCCGGAAGAA
TTGCCGAAGA TCGAGGCCAA GCTCGCCAAC GGCCTGCCGG ACGACACCTC GTCGGCGGCT
TCGGCCGACA AGAAAAAAGA AGACGGCAAG GGCGGCTGA
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| Protein sequence | MLLHRLRRSM FVAVTVAALP IAGQALAQTP DHPADNSAQF PSGQDLRSMT TAGSYLAARH
ASVERDAAAA AAFYRSALRT DPKNNELLDR AFISSLAEGN IDEAVKLADR ILKIDKTNRV
ARLVLGARDL KTKKYASAIQ NVNLSVRGPI TDLIATLLAS WAMEGAGDVK GAVANIDKLA
GPEWYPIFKD LHSGMILELA NRQKDAGVRF ERAYKLDDSA LRVMDAYARW LSRNKDDKSA
VAVYESFDKK LSRHPLVVEG LNDTKAGKKL PPLVDSPQAG AAEALYGIGA SLTRRGGEDL
ALVYLQLALY LQPDHALALL ALGDLYESVK KPQMAVKVYE RVPANSPLKR NAQIQLATDL
DATDRSEEAI KILKTVIAED GKDLEAIMAL GNIERGRKKF ADCAVTYSQG IDALSGAEKN
SWVYYYFRGI CEERSKQWAK AEIDMKKALQ LQPEQPHVLN YLGYSWIDQG INLDEAMKMI
KRAVDQRPDD GYIVDSLGWA YYRIGNYEDA VKTLERAIDL KPEDPTINDH LGDAYWRVGR
TLEARFQWAH ARDLKPDPEE LPKIEAKLAN GLPDDTSSAA SADKKKEDGK GG
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