| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1206 |
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| Symbol | |
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| ID | 4021682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1363937 |
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| End bp | 1365118 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961398 |
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| Product | radical SAM family protein |
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| Protein accession | YP_568345 |
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| Protein GI | 91975686 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.649327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCT ATCTTCGAGG CATGAGCAGA GCATCCAATG CCCTCAAGCG CCCGCCGGTC
AAGGCGCCCT CCGAGCCGGT GGGCGCAATC TCCCCTTTTC CCGCGATCGA GGTTGCGATC
GACAAGCAGC GACGACGTGG TCGCGGCGCG CAATCGAACG ACAGCGGCCG CTTCGAGGCC
GAAGCGCGGG TCGCGTTCGA CGACGGCTGG CAGAGCCTCG ACGAATTGCC GCCGTTCAAG
ACCACCGTCG CGCTCGACAC CGCCCGCAAA GTGATCACCC GCAACGAGTC GCCGGATATC
GGCTTCGACC GTTCGATCAA TCCGTATCGC GGCTGCGAGC ATGGCTGCGT GTATTGCTTC
GCGCGGCCGA CCCACGCGTT TCTCGGGCTG TCGCCGGGGC TGGATTTCGA GTCGCGGCTG
TTCGCCAAGC CGGATGCGCC GGCGCTGCTC GAGAAGGAAC TCGCCGCCGC CGATTACGAG
CCGCGGATGA TCGCGATCGG CACCAACACC GATCCGTATC AGCCGATCGA GCGCGAGCGG
AAGATCATGC GCGGCATCCT CGAAGTGCTG GAGAAGACCG GGCATCCGGT CGGCATCGTC
ACCAAATCGG CGCTGGTGAC GCGCGATATC GATATCCTGG CGCGGATGGC GAAGCGTCAG
CTCGCCAAGG TCGCGCTGTC GGTGACGTCG CTCGATCCCA AGCTCGCGCG CTCCATGGAG
CCCCGCGCGT CCTCGCCGGC GAACCGGCTC GAGGCGCTGA AGCGTTTGTC CGACGCGGGC
ATCCCGACCA CGGTGATGGT GGCGCCGGTG ATCCCGGCGC TGAACGACAT CGAGATCGAG
CGCATTCTGG ACGCCGCCGC CCATGCCGGC GTCAAGGAAG CGAGCTATGT GATGCTGCGG
CTGCCGCTCG AAGTCCGCGA TTTGTTCCGC GAATGGCTGA TGGCGAACTA TCCGGACCGC
TATCGCCATG TCTTCACCAT GATCCGCGAC ATGCGCGGCG GCCGCGACTA TGACTCGCAA
TGGGGCACGC GAATGAAGGG CACCGGCCCG ATCGCCTGGA TGATCGGCCG CCGGTTCGAG
ACCGCCTGCG CCCGGCTCGG ACTGAACAAG CGTCGCTCGA AACTCACCAC GGACCATTTC
GCGAAACCTG AGCGGGCCGG GCAGCAGTTG AGTTTGTTCT GA
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| Protein sequence | MTRYLRGMSR ASNALKRPPV KAPSEPVGAI SPFPAIEVAI DKQRRRGRGA QSNDSGRFEA
EARVAFDDGW QSLDELPPFK TTVALDTARK VITRNESPDI GFDRSINPYR GCEHGCVYCF
ARPTHAFLGL SPGLDFESRL FAKPDAPALL EKELAAADYE PRMIAIGTNT DPYQPIERER
KIMRGILEVL EKTGHPVGIV TKSALVTRDI DILARMAKRQ LAKVALSVTS LDPKLARSME
PRASSPANRL EALKRLSDAG IPTTVMVAPV IPALNDIEIE RILDAAAHAG VKEASYVMLR
LPLEVRDLFR EWLMANYPDR YRHVFTMIRD MRGGRDYDSQ WGTRMKGTGP IAWMIGRRFE
TACARLGLNK RRSKLTTDHF AKPERAGQQL SLF
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