| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1161 |
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| Symbol | |
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| ID | 4021637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1320750 |
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| End bp | 1322195 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637961353 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_568300 |
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| Protein GI | 91975641 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGC GCGTCACCGT CGGCCCGTTC AATCGCGTCG AGGGCGATCT CGAAGTGCGG
CTCGACATCG ACGGCGGCGT GGTGACCTCG GCGGAAGTCA CAGCGCCTTT GTATCGCGGC
TTCGAGCAGA TCCTGCGCGG ACGGCCGGCG CTCGATGCGC TGACGCTGGC GCCGCGGATC
TGCGGCATCT GCTCGGTGTC GCAATCGCTC GCCGCGGCGG CGGCGTTGCG TGCGGTCGAC
GGTTTCCGCG CTGCCGATAA CGGCGTGCTG GCGGCAAACC TCGCCCATGC GGCGGAGAAC
GCCGCCGATC ACCTCACGCA TTTCTATCTC TTTTTCATGC CCGACTTCGC CCGCGACGCC
TATGCGGCGC GGCCATGGCA TCCGGACATC GCGACGCGGT TCAAGGCGGT GCAAGGCAGC
GCAGCGCAGC AGATGCTGCC GGCGCGGGCG CGGCTGCTGC AGATCATGGG CCTGCTCGCC
GGCAAATGGC CGCATTCGCT TGCGTTCCAG CCCGGCGGCA CCACCCGCGC GATCGACCTC
GGTGAGCGCG TGCAATTGCT GTCGATCATC GGCGATCTGC GCGACGTGCT CGAACGCATC
GTGTTCGCCG ACAGTCTCGA TAATGTCCTG GCGCTCGACA GCGCGGCGGC GCTGGAGCGA
TGGCGCGACG GGCGCGGCGG CGATTTCGCC CGTTTCCTCG CGCTCGCCGA CGATCTTGCG
CTCGATCGGC TCGGCCGCAT CGCATTGCCG CTGATGAGCT ACGGCGCGTA TCACGGCGGC
GACGCGCCGC TGTTCGCCGC CGGCGTGTTC GACCCCGCGA CTGCGCAGGC GCATCCGCTC
GATCCGAACG ACATCTCCGA AGACGTCGCG CGCGCCTGGA TGCGCGATAC CTCGTTGCGT
CCGTCGGAAG CCGAGACCGA TCCGGATGCC GACAAGCAAG CGGGCTATAG CTGGTGCAAG
GCGCCGCGGC TCGCCGGGCG GCCGGTCGAA GTCGGCGCGC TGGCGCGGCA GGCGGTCGAC
GGCGATCCGC TGATCCGCGA TCTGCTGGCA CGCCAAGGAC CGAACGTGTC GGTGCGGGTG
ATCGCACGGC TGATCGAGAC TGCGCGGCTC GCCGCCGCGA TGCATGATTG GGCGCGGCGG
CTGGACCTGC GCGCGCCGTT CCTGGAGCGC GCCGAGCGGC GCGGCGAGGG CGCCGGCATC
GGCCTGATCG AAGCCGCGCG CGGCAGTCTC GGCCACTGGA TTGAATTGTC CGACGACAAC
ATCCGCCGTT ACCAGATCAT CGCGCCGACC ACCTGGAATT TCTCCCCGCG CGATCGCGAC
GGCGTCGCCG GTCCGCTGGA ACAGGCGCTC GCCGGGACCG CGGTCGGCGA CGAGGGCGCG
CGATCCGTCG CGATCCAGCA CATCGTCCGC TCGTTCGATC CCTGCATGGT GTGCACCGCA
CACTGA
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| Protein sequence | MNRRVTVGPF NRVEGDLEVR LDIDGGVVTS AEVTAPLYRG FEQILRGRPA LDALTLAPRI
CGICSVSQSL AAAAALRAVD GFRAADNGVL AANLAHAAEN AADHLTHFYL FFMPDFARDA
YAARPWHPDI ATRFKAVQGS AAQQMLPARA RLLQIMGLLA GKWPHSLAFQ PGGTTRAIDL
GERVQLLSII GDLRDVLERI VFADSLDNVL ALDSAAALER WRDGRGGDFA RFLALADDLA
LDRLGRIALP LMSYGAYHGG DAPLFAAGVF DPATAQAHPL DPNDISEDVA RAWMRDTSLR
PSEAETDPDA DKQAGYSWCK APRLAGRPVE VGALARQAVD GDPLIRDLLA RQGPNVSVRV
IARLIETARL AAAMHDWARR LDLRAPFLER AERRGEGAGI GLIEAARGSL GHWIELSDDN
IRRYQIIAPT TWNFSPRDRD GVAGPLEQAL AGTAVGDEGA RSVAIQHIVR SFDPCMVCTA
H
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